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Cluster: HRGMv2_3292_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3292_1 HRGMv2_3292_1_240 283407 285014 - GT83
TC HRGMv2_3292_1 HRGMv2_3292_1_241 285102 286067 - 2.A.59.2.1
NULL(UNKNOWN) HRGMv2_3292_1 HRGMv2_3292_1_242 286226 286639 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3292_1 HRGMv2_3292_1_243 286951 288342 - 2.A.3.1.4
TC HRGMv2_3292_1 HRGMv2_3292_1_244 288898 289671 + 3.A.1.3.23
TC HRGMv2_3292_1 HRGMv2_3292_1_245 289685 290437 + 3.A.1.3.23
TC HRGMv2_3292_1 HRGMv2_3292_1_246 290512 291207 + 3.A.1.3.23
TC HRGMv2_3292_1 HRGMv2_3292_1_247 291204 291935 + 3.A.1.3.23
Gene ID: HRGMv2_3292_1_240
Type: CAZyme
Location: 283407 - 285014 (-)
Gene ID: HRGMv2_3292_1_241
Type: TC
Location: 285102 - 286067 (-)
Gene ID: HRGMv2_3292_1_242
Type:
Location: 286226 - 286639 (+)
Gene ID: HRGMv2_3292_1_243
Type: TC
Location: 286951 - 288342 (-)
Gene ID: HRGMv2_3292_1_244
Type: TC
Location: 288898 - 289671 (+)
Gene ID: HRGMv2_3292_1_245
Type: TC
Location: 289685 - 290437 (+)
Gene ID: HRGMv2_3292_1_246
Type: TC
Location: 290512 - 291207 (+)
Gene ID: HRGMv2_3292_1_247
Type: TC
Location: 291204 - 291935 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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