dbCAN Logo

Cluster: HRGMv2_3292_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3292_12 HRGMv2_3292_12_113 135592 136089 + 9.B.20.2.1
pfam HRGMv2_3292_12 HRGMv2_3292_12_114 136096 137133 - Peptidase_M10_C
NULL(UNKNOWN) HRGMv2_3292_12 HRGMv2_3292_12_115 137318 137476 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3292_12 HRGMv2_3292_12_116 137680 139668 + GH13_3
CAZyme HRGMv2_3292_12 HRGMv2_3292_12_117 139835 143182 + GH13_16
CAZyme HRGMv2_3292_12 HRGMv2_3292_12_118 143179 145425 + CBM48 | GH13_9
TC HRGMv2_3292_12 HRGMv2_3292_12_119 145468 146628 + 9.B.34.1.4
TC HRGMv2_3292_12 HRGMv2_3292_12_120 146607 148811 - 2.A.21.9.1
pfam HRGMv2_3292_12 HRGMv2_3292_12_121 148984 149835 - CAP
TC HRGMv2_3292_12 HRGMv2_3292_12_122 149917 151137 - 2.A.1.3.17
Gene ID: HRGMv2_3292_12_113
Type: TC
Location: 135592 - 136089 (+)
Gene ID: HRGMv2_3292_12_114
Type: pfam
Location: 136096 - 137133 (-)
Gene ID: HRGMv2_3292_12_115
Type:
Location: 137318 - 137476 (-)
Gene ID: HRGMv2_3292_12_116
Type: CAZyme
Location: 137680 - 139668 (+)
Gene ID: HRGMv2_3292_12_117
Type: CAZyme
Location: 139835 - 143182 (+)
Gene ID: HRGMv2_3292_12_118
Type: CAZyme
Location: 143179 - 145425 (+)
Gene ID: HRGMv2_3292_12_119
Type: TC
Location: 145468 - 146628 (+)
Gene ID: HRGMv2_3292_12_120
Type: TC
Location: 146607 - 148811 (-)
Gene ID: HRGMv2_3292_12_121
Type: pfam
Location: 148984 - 149835 (-)
Gene ID: HRGMv2_3292_12_122
Type: TC
Location: 149917 - 151137 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List