Genome Details
Selected Rep_genome_ID: HRGMv2_2094
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2094 | 3,757,766 | 98.52% | 0.241% | Ethiopia | Africa | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2094_CGC5 | CGCFAM_00039 | Yes | 8 | 4 | |
| HRGMv2_2094_CGC3 | - | Yes | 13 | 4 | N/A |
| HRGMv2_2094_CGC1 | CGCFAM_00064 | Yes | 5 | 1 | |
| HRGMv2_2094_CGC31 | CGCFAM_00078 | Yes | 3 | 2 | galactan |
| HRGMv2_2094_CGC33 | CGCFAM_00078 | Yes | 4 | 2 | galactan |
| HRGMv2_2094_CGC14 | CGCFAM_00106 | Yes | 7 | 3 | alpha-glucan |
| HRGMv2_2094_CGC15 | CGCFAM_00226 | Yes | 17 | 8 | beta-mannan |
| HRGMv2_2094_CGC12 | CGCFAM_00233 | Yes | 6 | 2 | |
| HRGMv2_2094_CGC6 | CGCFAM_00270 | Yes | 6 | 1 | |
| HRGMv2_2094_CGC19 | CGCFAM_00558 | Yes | 3 | 1 | |
| HRGMv2_2094_CGC18 | CGCFAM_00859 | Yes | 11 | 3 | |
| HRGMv2_2094_CGC37 | CGCFAM_00903 | Yes | 6 | 1 | |
| HRGMv2_2094_CGC40 | CGCFAM_00951 | Yes | 9 | 2 | |
| HRGMv2_2094_CGC38 | CGCFAM_01851 | Yes | 5 | 1 | |
| HRGMv2_2094_CGC22 | CGCFAM_02383 | Yes | 16 | 2 | |
| HRGMv2_2094_CGC27 | CGCFAM_03217 | Yes | 6 | 3 | |
| HRGMv2_2094_CGC13 | CGCFAM_04331 | Yes | 3 | 1 | |
| HRGMv2_2094_CGC34 | CGCFAM_04655 | Yes | 3 | 1 | |
| HRGMv2_2094_CGC28 | CGCFAM_04886 | Yes | 6 | 1 | |
| HRGMv2_2094_CGC17 | CGCFAM_05433 | Yes | 7 | 1 | |
| HRGMv2_2094_CGC29 | CGCFAM_09957 | Yes | 4 | 1 |
Top CAZyme Families