Cluster: HRGMv2_2094_CGC34
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2094
- CGC Family ID: CGCFAM_04655
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2094_40 | HRGMv2_2094_40_7 | 7428 | 9449 | - | GH133 |
| NULL(UNKNOWN) | HRGMv2_2094_40 | HRGMv2_2094_40_8 | 9616 | 10113 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2094_40 | HRGMv2_2094_40_9 | 10169 | 10891 | + | 3.A.1.12.10 |
Gene ID: HRGMv2_2094_40_7
Type: CAZyme
Location: 7428 - 9449 (-)
Type: CAZyme
Location: 7428 - 9449 (-)
Gene ID: HRGMv2_2094_40_8
Type:
Location: 9616 - 10113 (+)
Type:
Location: 9616 - 10113 (+)
Gene ID: HRGMv2_2094_40_9
Type: TC
Location: 10169 - 10891 (+)
Type: TC
Location: 10169 - 10891 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.