Cluster: HRGMv2_2094_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2094
- CGC Family ID: CGCFAM_04331
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2094_5 | HRGMv2_2094_5_26 | 28788 | 29717 | + | 1.A.35.3.2 |
| NULL(UNKNOWN) | HRGMv2_2094_5 | HRGMv2_2094_5_27 | 29746 | 29982 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2094_5 | HRGMv2_2094_5_28 | 30068 | 32320 | + | GH31_1 |
Gene ID: HRGMv2_2094_5_26
Type: TC
Location: 28788 - 29717 (+)
Type: TC
Location: 28788 - 29717 (+)
Gene ID: HRGMv2_2094_5_27
Type:
Location: 29746 - 29982 (+)
Type:
Location: 29746 - 29982 (+)
Gene ID: HRGMv2_2094_5_28
Type: CAZyme
Location: 30068 - 32320 (+)
Type: CAZyme
Location: 30068 - 32320 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.