Cluster: HRGMv2_2094_CGC31
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate: galactan
- Genome ID: HRGMv2_2094
- CGC Family ID: CGCFAM_00078
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2094_23 | HRGMv2_2094_23_35 | 35225 | 37126 | - | GH2 |
| CAZyme | HRGMv2_2094_23 | HRGMv2_2094_23_36 | 37198 | 38634 | - | GH29 |
| TC | HRGMv2_2094_23 | HRGMv2_2094_23_37 | 38636 | 39997 | - | 2.A.2.3.2 |
Gene ID: HRGMv2_2094_23_35
Type: CAZyme
Location: 35225 - 37126 (-)
Type: CAZyme
Location: 35225 - 37126 (-)
Gene ID: HRGMv2_2094_23_36
Type: CAZyme
Location: 37198 - 38634 (-)
Type: CAZyme
Location: 37198 - 38634 (-)
Gene ID: HRGMv2_2094_23_37
Type: TC
Location: 38636 - 39997 (-)
Type: TC
Location: 38636 - 39997 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.