Cluster: HRGMv2_2094_CGC19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2094
- CGC Family ID: CGCFAM_00558
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2094_10 | HRGMv2_2094_10_63 | 72692 | 73831 | - | CE9 |
| pfam | HRGMv2_2094_10 | HRGMv2_2094_10_64 | 73890 | 74177 | - | YajC |
| TC | HRGMv2_2094_10 | HRGMv2_2094_10_65 | 74180 | 74611 | - | 4.A.6.1.14 |
Gene ID: HRGMv2_2094_10_63
Type: CAZyme
Location: 72692 - 73831 (-)
Type: CAZyme
Location: 72692 - 73831 (-)
Gene ID: HRGMv2_2094_10_64
Type: pfam
Location: 73890 - 74177 (-)
Type: pfam
Location: 73890 - 74177 (-)
Gene ID: HRGMv2_2094_10_65
Type: TC
Location: 74180 - 74611 (-)
Type: TC
Location: 74180 - 74611 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.