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Genome Details

Selected Rep_genome_ID: HRGMv2_2064
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Agathobacter
→
Species
Agathobacter sp900546625
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
GH146_bin.53 2,466,504 96.62% 0% NA Africa H3AfricaPhase2
HRGMv2_2064 3,067,365 99.51% 0% Ghana Africa HRGM
REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-A-D_L_5_1538.51 2,695,115 93.48% 0.48% NA Africa Hadza
Rep_2184 2,535,418 94.2029% 0.966184% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_2064_CGC5 CGCFAM_00002 Yes 6 2
HRGMv2_2064_CGC23 CGCFAM_00049 Yes 6 1
HRGMv2_2064_CGC18 CGCFAM_00064 Yes 7 4
HRGMv2_2064_CGC30 CGCFAM_00102 Yes 8 1
HRGMv2_2064_CGC7 CGCFAM_00106 Yes 8 2 alpha-glucan
HRGMv2_2064_CGC34 CGCFAM_00270 Yes 8 1
HRGMv2_2064_CGC2 CGCFAM_00411 Yes 4 1
HRGMv2_2064_CGC31 CGCFAM_00420 Yes 7 2
HRGMv2_2064_CGC6 CGCFAM_00539 Yes 3 1
HRGMv2_2064_CGC36 CGCFAM_00586 Yes 9 4
HRGMv2_2064_CGC4 CGCFAM_01044 Yes 3 2
HRGMv2_2064_CGC12 CGCFAM_02085 Yes 4 2
HRGMv2_2064_CGC22 CGCFAM_03716 Yes 3 1
HRGMv2_2064_CGC27 CGCFAM_04034 Yes 7 1
HRGMv2_2064_CGC9 CGCFAM_04280 Yes 14 2
HRGMv2_2064_CGC3 CGCFAM_04660 Yes 4 1
HRGMv2_2064_CGC10 CGCFAM_06091 Yes 11 2
HRGMv2_2064_CGC33 CGCFAM_06092 Yes 6 2
HRGMv2_2064_CGC16 CGCFAM_06403 Yes 14 1
HRGMv2_2064_CGC20 CGCFAM_06836 Yes 3 1
HRGMv2_2064_CGC1 CGCFAM_09944 Yes 6 1
HRGMv2_2064_CGC14 CGCFAM_09945 Yes 11 1
HRGMv2_2064_CGC17 CGCFAM_09946 Yes 9 4
HRGMv2_2064_CGC26 CGCFAM_09947 Yes 3 1
HRGMv2_2064_CGC35 CGCFAM_09948 Yes 4 1
Top CAZyme Families