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Cluster: HRGMv2_2064_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2064_34 HRGMv2_2064_34_8 7700 9970 - GH36
NULL(UNKNOWN) HRGMv2_2064_34 HRGMv2_2064_34_9 9927 10529 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2064_34 HRGMv2_2064_34_10 10526 11698 - GH130_1
pfam HRGMv2_2064_34 HRGMv2_2064_34_11 11776 12942 - GlcNAc_2-epim
CAZyme HRGMv2_2064_34 HRGMv2_2064_34_12 12945 13967 - GH130_2
TC HRGMv2_2064_34 HRGMv2_2064_34_13 14010 14852 - 3.A.1.1.34
TC HRGMv2_2064_34 HRGMv2_2064_34_14 14852 15850 - 3.A.1.1.25
STP HRGMv2_2064_34 HRGMv2_2064_34_15 15950 17317 - SBP_bac_1
CAZyme HRGMv2_2064_34 HRGMv2_2064_34_16 17773 18708 - GH113
Gene ID: HRGMv2_2064_34_8
Type: CAZyme
Location: 7700 - 9970 (-)
Gene ID: HRGMv2_2064_34_9
Type:
Location: 9927 - 10529 (-)
Gene ID: HRGMv2_2064_34_10
Type: CAZyme
Location: 10526 - 11698 (-)
Gene ID: HRGMv2_2064_34_11
Type: pfam
Location: 11776 - 12942 (-)
Gene ID: HRGMv2_2064_34_12
Type: CAZyme
Location: 12945 - 13967 (-)
Gene ID: HRGMv2_2064_34_13
Type: TC
Location: 14010 - 14852 (-)
Gene ID: HRGMv2_2064_34_14
Type: TC
Location: 14852 - 15850 (-)
Gene ID: HRGMv2_2064_34_15
Type: STP
Location: 15950 - 17317 (-)
Gene ID: HRGMv2_2064_34_16
Type: CAZyme
Location: 17773 - 18708 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2064_34_12 vegetarian > omnivore 1.42569 0.00863

🧭 Explore Read Mapping of CGC

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