dbCAN Logo

Cluster: HRGMv2_2064_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2064_6 HRGMv2_2064_6_110 106529 107914 + 3.A.1.1.45
TC HRGMv2_2064_6 HRGMv2_2064_6_111 108002 108859 + 3.A.1.1.45
TC HRGMv2_2064_6 HRGMv2_2064_6_112 108859 109770 + 3.A.1.1.45
TF HRGMv2_2064_6 HRGMv2_2064_6_113 109952 110956 + LacI
TC HRGMv2_2064_6 HRGMv2_2064_6_114 111009 112175 + 2.A.86.1.8
TC HRGMv2_2064_6 HRGMv2_2064_6_115 112370 113710 + 2.A.66.1.33
TF HRGMv2_2064_6 HRGMv2_2064_6_116 113811 114836 - LacI
TC HRGMv2_2064_6 HRGMv2_2064_6_117 115047 115961 + 3.A.1.1.10
TC HRGMv2_2064_6 HRGMv2_2064_6_118 115974 116876 + 3.A.1.1.29
NULL(UNKNOWN) HRGMv2_2064_6 HRGMv2_2064_6_119 116897 118585 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2064_6 HRGMv2_2064_6_120 118641 120107 + GH32
STP HRGMv2_2064_6 HRGMv2_2064_6_121 120191 121138 + PfkB
TC HRGMv2_2064_6 HRGMv2_2064_6_122 121294 123432 + 2.A.53.4.1
TC HRGMv2_2064_6 HRGMv2_2064_6_123 123429 125408 + 2.A.16.2.2
Gene ID: HRGMv2_2064_6_110
Type: TC
Location: 106529 - 107914 (+)
Gene ID: HRGMv2_2064_6_111
Type: TC
Location: 108002 - 108859 (+)
Gene ID: HRGMv2_2064_6_112
Type: TC
Location: 108859 - 109770 (+)
Gene ID: HRGMv2_2064_6_113
Type: TF
Location: 109952 - 110956 (+)
Gene ID: HRGMv2_2064_6_114
Type: TC
Location: 111009 - 112175 (+)
Gene ID: HRGMv2_2064_6_115
Type: TC
Location: 112370 - 113710 (+)
Gene ID: HRGMv2_2064_6_116
Type: TF
Location: 113811 - 114836 (-)
Gene ID: HRGMv2_2064_6_117
Type: TC
Location: 115047 - 115961 (+)
Gene ID: HRGMv2_2064_6_118
Type: TC
Location: 115974 - 116876 (+)
Gene ID: HRGMv2_2064_6_119
Type:
Location: 116897 - 118585 (+)
Gene ID: HRGMv2_2064_6_120
Type: CAZyme
Location: 118641 - 120107 (+)
Gene ID: HRGMv2_2064_6_121
Type: STP
Location: 120191 - 121138 (+)
Gene ID: HRGMv2_2064_6_122
Type: TC
Location: 121294 - 123432 (+)
Gene ID: HRGMv2_2064_6_123
Type: TC
Location: 123429 - 125408 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List