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Cluster: HRGMv2_2064_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2064_4 HRGMv2_2064_4_57 68563 72171 + GH53
TC HRGMv2_2064_4 HRGMv2_2064_4_58 72294 73745 - 2.A.21.2.5
TC HRGMv2_2064_4 HRGMv2_2064_4_59 73950 75335 + 2.A.25.1.3
TC HRGMv2_2064_4 HRGMv2_2064_4_60 75618 76553 + 2.A.19.5.2
peptidase HRGMv2_2064_4 HRGMv2_2064_4_61 76851 78653 - S08.UPA
pfam HRGMv2_2064_4 HRGMv2_2064_4_62 78773 80134 + Biotin_lipoyl_2
TC HRGMv2_2064_4 HRGMv2_2064_4_63 80135 80839 + 3.A.1.122.2
pfam HRGMv2_2064_4 HRGMv2_2064_4_64 80817 82367 + Biotin_lipoyl_2
TC HRGMv2_2064_4 HRGMv2_2064_4_65 82392 83651 + 3.A.1.122.2
STP HRGMv2_2064_4 HRGMv2_2064_4_66 83891 85348 + Fer4 | Fer4
CAZyme HRGMv2_2064_4 HRGMv2_2064_4_67 85697 87166 + CE4
Gene ID: HRGMv2_2064_4_57
Type: CAZyme
Location: 68563 - 72171 (+)
Gene ID: HRGMv2_2064_4_58
Type: TC
Location: 72294 - 73745 (-)
Gene ID: HRGMv2_2064_4_59
Type: TC
Location: 73950 - 75335 (+)
Gene ID: HRGMv2_2064_4_60
Type: TC
Location: 75618 - 76553 (+)
Gene ID: HRGMv2_2064_4_61
Type: peptidase
Location: 76851 - 78653 (-)
Gene ID: HRGMv2_2064_4_62
Type: pfam
Location: 78773 - 80134 (+)
Gene ID: HRGMv2_2064_4_63
Type: TC
Location: 80135 - 80839 (+)
Gene ID: HRGMv2_2064_4_64
Type: pfam
Location: 80817 - 82367 (+)
Gene ID: HRGMv2_2064_4_65
Type: TC
Location: 82392 - 83651 (+)
Gene ID: HRGMv2_2064_4_66
Type: STP
Location: 83891 - 85348 (+)
Gene ID: HRGMv2_2064_4_67
Type: CAZyme
Location: 85697 - 87166 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2064_4_58 omnivore > vegetarian 1.15204 0.02252

🧭 Explore Read Mapping of CGC

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