Cluster: HRGMv2_2064_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2064
- CGC Family ID: CGCFAM_02085
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2064_5 | HRGMv2_2064_5_44 | 39956 | 40795 | + | GT8 |
| CAZyme | HRGMv2_2064_5 | HRGMv2_2064_5_45 | 40838 | 42643 | + | GT8 |
| TF | HRGMv2_2064_5 | HRGMv2_2064_5_46 | 42736 | 43521 | + | Trans_reg_C |
| TC | HRGMv2_2064_5 | HRGMv2_2064_5_47 | 43633 | 44550 | + | 3.A.1.131.1 |
Gene ID: HRGMv2_2064_5_44
Type: CAZyme
Location: 39956 - 40795 (+)
Type: CAZyme
Location: 39956 - 40795 (+)
Gene ID: HRGMv2_2064_5_45
Type: CAZyme
Location: 40838 - 42643 (+)
Type: CAZyme
Location: 40838 - 42643 (+)
Gene ID: HRGMv2_2064_5_46
Type: TF
Location: 42736 - 43521 (+)
Type: TF
Location: 42736 - 43521 (+)
Gene ID: HRGMv2_2064_5_47
Type: TC
Location: 43633 - 44550 (+)
Type: TC
Location: 43633 - 44550 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp900546625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.