Cluster: HRGMv2_2064_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2064
- CGC Family ID: CGCFAM_01044
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2064_1 | HRGMv2_2064_1_173 | 192558 | 194387 | + | GH13_14 |
| TC | HRGMv2_2064_1 | HRGMv2_2064_1_174 | 194384 | 195655 | - | 2.A.49.9.2 |
| CAZyme | HRGMv2_2064_1 | HRGMv2_2064_1_175 | 195856 | 197421 | + | GH77 |
Gene ID: HRGMv2_2064_1_173
Type: CAZyme
Location: 192558 - 194387 (+)
Type: CAZyme
Location: 192558 - 194387 (+)
Gene ID: HRGMv2_2064_1_174
Type: TC
Location: 194384 - 195655 (-)
Type: TC
Location: 194384 - 195655 (-)
Gene ID: HRGMv2_2064_1_175
Type: CAZyme
Location: 195856 - 197421 (+)
Type: CAZyme
Location: 195856 - 197421 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp900546625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.