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Cluster: HRGMv2_2064_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2064_30 HRGMv2_2064_30_12 19408 21663 + 3.A.1.135.6
TC HRGMv2_2064_30 HRGMv2_2064_30_13 21665 23518 + 3.A.1.135.6
STP HRGMv2_2064_30 HRGMv2_2064_30_14 23817 24365 + Spo0A_C
CAZyme HRGMv2_2064_30 HRGMv2_2064_30_15 24534 25985 + GT5
pfam HRGMv2_2064_30 HRGMv2_2064_30_16 26058 26951 - DUF5688
TC HRGMv2_2064_30 HRGMv2_2064_30_17 27130 29004 - 3.A.1.11.7
TC HRGMv2_2064_30 HRGMv2_2064_30_18 28998 29822 - 3.A.1.11.8
TC HRGMv2_2064_30 HRGMv2_2064_30_19 29815 30888 - 3.A.1.11.8
Gene ID: HRGMv2_2064_30_12
Type: TC
Location: 19408 - 21663 (+)
Gene ID: HRGMv2_2064_30_13
Type: TC
Location: 21665 - 23518 (+)
Gene ID: HRGMv2_2064_30_14
Type: STP
Location: 23817 - 24365 (+)
Gene ID: HRGMv2_2064_30_15
Type: CAZyme
Location: 24534 - 25985 (+)
Gene ID: HRGMv2_2064_30_16
Type: pfam
Location: 26058 - 26951 (-)
Gene ID: HRGMv2_2064_30_17
Type: TC
Location: 27130 - 29004 (-)
Gene ID: HRGMv2_2064_30_18
Type: TC
Location: 28998 - 29822 (-)
Gene ID: HRGMv2_2064_30_19
Type: TC
Location: 29815 - 30888 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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