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Cluster: HRGMv2_2064_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2064_7 HRGMv2_2064_7_70 76755 77021 + 8.A.8.1.6
CAZyme HRGMv2_2064_7 HRGMv2_2064_7_71 77057 78064 + GT2
CAZyme HRGMv2_2064_7 HRGMv2_2064_7_72 78125 79252 + GT2
CAZyme HRGMv2_2064_7 HRGMv2_2064_7_73 79286 80347 + GT2
peptidase HRGMv2_2064_7 HRGMv2_2064_7_74 80491 82563 + C82.UPA
TC HRGMv2_2064_7 HRGMv2_2064_7_75 82791 83573 + 8.A.3.2.3
TC HRGMv2_2064_7 HRGMv2_2064_7_76 83573 84298 + 8.A.3.2.2
pfam HRGMv2_2064_7 HRGMv2_2064_7_77 84337 85407 + LytR_cpsA_psr
CAZyme HRGMv2_2064_7 HRGMv2_2064_7_78 85410 86657 + GH3
Gene ID: HRGMv2_2064_7_70
Type: TC
Location: 76755 - 77021 (+)
Gene ID: HRGMv2_2064_7_71
Type: CAZyme
Location: 77057 - 78064 (+)
Gene ID: HRGMv2_2064_7_72
Type: CAZyme
Location: 78125 - 79252 (+)
Gene ID: HRGMv2_2064_7_73
Type: CAZyme
Location: 79286 - 80347 (+)
Gene ID: HRGMv2_2064_7_74
Type: peptidase
Location: 80491 - 82563 (+)
Gene ID: HRGMv2_2064_7_75
Type: TC
Location: 82791 - 83573 (+)
Gene ID: HRGMv2_2064_7_76
Type: TC
Location: 83573 - 84298 (+)
Gene ID: HRGMv2_2064_7_77
Type: pfam
Location: 84337 - 85407 (+)
Gene ID: HRGMv2_2064_7_78
Type: CAZyme
Location: 85410 - 86657 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2064_7_72 vegetarian > vegan 2.17666 0.00603
HRGMv2_2064_7_73 vegetarian > vegan 2.30473 0.00603

🧭 Explore Read Mapping of CGC

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