Cluster: HRGMv2_2064_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2064
- CGC Family ID: CGCFAM_00002
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2064_2 | HRGMv2_2064_2_94 | 96865 | 98313 | + | 9.B.18.1.2 |
| STP | HRGMv2_2064_2 | HRGMv2_2064_2_95 | 98427 | 99554 | + | Aminotran_1_2 |
| CAZyme | HRGMv2_2064_2 | HRGMv2_2064_2_96 | 99572 | 100687 | + | GT4 |
| pfam | HRGMv2_2064_2 | HRGMv2_2064_2_97 | 100691 | 101869 | + | PS_pyruv_trans |
| STP | HRGMv2_2064_2 | HRGMv2_2064_2_98 | 101866 | 103062 | + | Fer4 |
| CAZyme | HRGMv2_2064_2 | HRGMv2_2064_2_99 | 103063 | 104091 | + | GT2 |
Gene ID: HRGMv2_2064_2_94
Type: TC
Location: 96865 - 98313 (+)
Type: TC
Location: 96865 - 98313 (+)
Gene ID: HRGMv2_2064_2_95
Type: STP
Location: 98427 - 99554 (+)
Type: STP
Location: 98427 - 99554 (+)
Gene ID: HRGMv2_2064_2_96
Type: CAZyme
Location: 99572 - 100687 (+)
Type: CAZyme
Location: 99572 - 100687 (+)
Gene ID: HRGMv2_2064_2_97
Type: pfam
Location: 100691 - 101869 (+)
Type: pfam
Location: 100691 - 101869 (+)
Gene ID: HRGMv2_2064_2_98
Type: STP
Location: 101866 - 103062 (+)
Type: STP
Location: 101866 - 103062 (+)
Gene ID: HRGMv2_2064_2_99
Type: CAZyme
Location: 103063 - 104091 (+)
Type: CAZyme
Location: 103063 - 104091 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp900546625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.