Cluster: HRGMv2_2064_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2064
- CGC Family ID: CGCFAM_00539
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2064_2 | HRGMv2_2064_2_180 | 184984 | 186138 | + | CE9 |
| TC | HRGMv2_2064_2 | HRGMv2_2064_2_181 | 186132 | 186611 | + | 4.A.1.1.11 |
| TC | HRGMv2_2064_2 | HRGMv2_2064_2_182 | 186685 | 188154 | + | 4.A.1.1.7 |
Gene ID: HRGMv2_2064_2_180
Type: CAZyme
Location: 184984 - 186138 (+)
Type: CAZyme
Location: 184984 - 186138 (+)
Gene ID: HRGMv2_2064_2_181
Type: TC
Location: 186132 - 186611 (+)
Type: TC
Location: 186132 - 186611 (+)
Gene ID: HRGMv2_2064_2_182
Type: TC
Location: 186685 - 188154 (+)
Type: TC
Location: 186685 - 188154 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp900546625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.