dbCAN Logo

Cluster: HRGMv2_2064_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2064_3 HRGMv2_2064_3_34 35634 37328 - GH13_36
TC HRGMv2_2064_3 HRGMv2_2064_3_35 37852 38739 - 3.A.1.1.27
TC HRGMv2_2064_3 HRGMv2_2064_3_36 38739 40118 - 3.A.1.1.27
STP HRGMv2_2064_3 HRGMv2_2064_3_37 40221 41489 - SBP_bac_1
CAZyme HRGMv2_2064_3 HRGMv2_2064_3_38 41565 43067 - GH77
TF HRGMv2_2064_3 HRGMv2_2064_3_39 43324 44337 + LacI
NULL(UNKNOWN) HRGMv2_2064_3 HRGMv2_2064_3_40 44370 46505 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2064_3 HRGMv2_2064_3_41 46962 48812 - 3.A.16.1.1
Gene ID: HRGMv2_2064_3_34
Type: CAZyme
Location: 35634 - 37328 (-)
Gene ID: HRGMv2_2064_3_35
Type: TC
Location: 37852 - 38739 (-)
Gene ID: HRGMv2_2064_3_36
Type: TC
Location: 38739 - 40118 (-)
Gene ID: HRGMv2_2064_3_37
Type: STP
Location: 40221 - 41489 (-)
Gene ID: HRGMv2_2064_3_38
Type: CAZyme
Location: 41565 - 43067 (-)
Gene ID: HRGMv2_2064_3_39
Type: TF
Location: 43324 - 44337 (+)
Gene ID: HRGMv2_2064_3_40
Type:
Location: 44370 - 46505 (+)
Gene ID: HRGMv2_2064_3_41
Type: TC
Location: 46962 - 48812 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List