Cluster: HRGMv2_2064_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2064
- CGC Family ID: CGCFAM_04660
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2064_1 | HRGMv2_2064_1_125 | 131804 | 132667 | + | 3.A.1.148.3 |
| NULL(UNKNOWN) | HRGMv2_2064_1 | HRGMv2_2064_1_126 | 132670 | 134775 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2064_1 | HRGMv2_2064_1_127 | 134884 | 135987 | - | Chorismate_synt |
| CAZyme | HRGMv2_2064_1 | HRGMv2_2064_1_128 | 136107 | 137882 | + | CBM34 | GH13_20 |
Gene ID: HRGMv2_2064_1_125
Type: TC
Location: 131804 - 132667 (+)
Type: TC
Location: 131804 - 132667 (+)
Gene ID: HRGMv2_2064_1_126
Type:
Location: 132670 - 134775 (+)
Type:
Location: 132670 - 134775 (+)
Gene ID: HRGMv2_2064_1_127
Type: pfam
Location: 134884 - 135987 (-)
Type: pfam
Location: 134884 - 135987 (-)
Gene ID: HRGMv2_2064_1_128
Type: CAZyme
Location: 136107 - 137882 (+)
Type: CAZyme
Location: 136107 - 137882 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp900546625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.