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Cluster: HRGMv2_2064_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2064_21 HRGMv2_2064_21_38 40803 43619 - 8.A.59.4.2
NULL(UNKNOWN) HRGMv2_2064_21 HRGMv2_2064_21_39 43700 44242 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2064_21 HRGMv2_2064_21_40 44277 45650 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2064_21 HRGMv2_2064_21_41 45629 47119 - GT4
TC HRGMv2_2064_21 HRGMv2_2064_21_42 47164 49413 - 3.A.5.10.1
pfam HRGMv2_2064_21 HRGMv2_2064_21_43 49484 50020 - Sec-ASP3
TC HRGMv2_2064_21 HRGMv2_2064_21_44 50060 51574 - 3.A.5.10.1
TC HRGMv2_2064_21 HRGMv2_2064_21_45 51567 53228 - 3.A.5.10.1
Gene ID: HRGMv2_2064_21_38
Type: TC
Location: 40803 - 43619 (-)
Gene ID: HRGMv2_2064_21_39
Type:
Location: 43700 - 44242 (-)
Gene ID: HRGMv2_2064_21_40
Type:
Location: 44277 - 45650 (-)
Gene ID: HRGMv2_2064_21_41
Type: CAZyme
Location: 45629 - 47119 (-)
Gene ID: HRGMv2_2064_21_42
Type: TC
Location: 47164 - 49413 (-)
Gene ID: HRGMv2_2064_21_43
Type: pfam
Location: 49484 - 50020 (-)
Gene ID: HRGMv2_2064_21_44
Type: TC
Location: 50060 - 51574 (-)
Gene ID: HRGMv2_2064_21_45
Type: TC
Location: 51567 - 53228 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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