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Genome Details

Selected Rep_genome_ID: A15.CMAG_2
Total Genomes Found: 15
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Roseburia
→
Species
Roseburia inulinivorans
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A15.CMAG_2 3,852,155 99.52% 0% China(Inner Mongolia) Asia IMGG
AG100_bin.19 2,900,271 94.69% 0% NA Africa H3AfricaPhase2
CGMR024593 3,135,095 96.14% 0.24% China Asia CGMR
CGMR091354 3,329,642 98.55% 0% China Asia CGMR
GCA_021624145.1_ASM2162414v1_genomic 2,812,990 90.52% 1.45% NA Africa H3AfricaPhase1
HRGMv2_2092 3,672,116 99.51% 0% Sardinia, Italy Europe HRGM
Rep_2177 3,777,536 95.9219% 1.50966% NA NA WIS
SPMP27_bin.37 2,891,457 91.55% 3.62% Singapore Asia SPMP
SPMP35_bin.82 3,701,353 99.03% 0.48% Singapore Asia SPMP
SPMP37_bin.103 3,117,665 94.93% 0.72% Singapore Asia SPMP
SPMP42_bin.35 3,604,827 96.47% 0.97% Singapore Asia SPMP
SPMP50_bin.33 3,682,692 94.52% 0.54% Singapore Asia SPMP
SPMP53_bin.78 3,166,575 92.75% 0.26% Singapore Asia SPMP
SPMP75_bin.70 3,225,814 98.37% 1.69% Singapore Asia SPMP
SPMP89_bin.30 3,711,276 95.8% 1.93% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
A15.CMAG_2_CGC20 CGCFAM_00002 Yes 4 3
A15.CMAG_2_CGC23 CGCFAM_00002 Yes 5 2
A15.CMAG_2_CGC22 CGCFAM_00003 Yes 15 6
A15.CMAG_2_CGC30 CGCFAM_00011 Yes 6 3
A15.CMAG_2_CGC24 CGCFAM_00039 Yes 7 4
A15.CMAG_2_CGC45 CGCFAM_00047 Yes 8 1
A15.CMAG_2_CGC21 CGCFAM_00064 Yes 3 1
A15.CMAG_2_CGC38 CGCFAM_00092 Yes 4 1
A15.CMAG_2_CGC3 CGCFAM_00106 Yes 10 3 alpha-glucan
A15.CMAG_2_CGC1 CGCFAM_00161 Yes 7 1
A15.CMAG_2_CGC34 CGCFAM_00270 Yes 6 1
A15.CMAG_2_CGC32 CGCFAM_00411 Yes 6 1
A15.CMAG_2_CGC7 CGCFAM_00420 Yes 5 1
A15.CMAG_2_CGC42 CGCFAM_00546 Yes 5 1
A15.CMAG_2_CGC9 CGCFAM_00596 Yes 6 1
A15.CMAG_2_CGC10 CGCFAM_00859 Yes 9 2
A15.CMAG_2_CGC41 CGCFAM_01550 Yes 10 4
A15.CMAG_2_CGC35 CGCFAM_01851 Yes 5 1
A15.CMAG_2_CGC8 CGCFAM_01886 Yes 4 1
A15.CMAG_2_CGC18 CGCFAM_02379 Yes 4 1
A15.CMAG_2_CGC29 CGCFAM_02383 Yes 18 1
A15.CMAG_2_CGC39 CGCFAM_02385 Yes 10 3
A15.CMAG_2_CGC19 CGCFAM_04325 Yes 4 1
A15.CMAG_2_CGC2 CGCFAM_04326 Yes 3 1
A15.CMAG_2_CGC25 CGCFAM_04328 Yes 5 1
Top CAZyme Families