Cluster: A15.CMAG_2_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A15.CMAG_2
- CGC Family ID: CGCFAM_00420
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A15_contig_688 | A15_contig_688_453 | 463278 | 464390 | - | GH172 |
| TC | A15_contig_688 | A15_contig_688_454 | 464499 | 465353 | - | 3.A.1.1.17 |
| TC | A15_contig_688 | A15_contig_688_455 | 465365 | 466243 | - | 3.A.1.1.41 |
| STP | A15_contig_688 | A15_contig_688_456 | 466393 | 467646 | - | SBP_bac_1 |
| TC | A15_contig_688 | A15_contig_688_457 | 467928 | 469757 | + | 8.A.59.2.1 |
Gene ID: A15_contig_688_453
Type: CAZyme
Location: 463278 - 464390 (-)
Type: CAZyme
Location: 463278 - 464390 (-)
Gene ID: A15_contig_688_454
Type: TC
Location: 464499 - 465353 (-)
Type: TC
Location: 464499 - 465353 (-)
Gene ID: A15_contig_688_455
Type: TC
Location: 465365 - 466243 (-)
Type: TC
Location: 465365 - 466243 (-)
Gene ID: A15_contig_688_456
Type: STP
Location: 466393 - 467646 (-)
Type: STP
Location: 466393 - 467646 (-)
Gene ID: A15_contig_688_457
Type: TC
Location: 467928 - 469757 (+)
Type: TC
Location: 467928 - 469757 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia inulinivorans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A15_contig_688_455 | vegetarian > vegan | 3.01964 | 0.00181 |
| A15_contig_688_457 | vegetarian > vegan | 3.04116 | 0.00181 |