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Cluster: A15.CMAG_2_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A15_contig_688 A15_contig_688_556 560587 561555 - 2.A.19.5.2
TC A15_contig_688 A15_contig_688_557 561922 562503 - 2.A.107.1.2
CAZyme A15_contig_688 A15_contig_688_558 562879 565107 - GH36
pfam A15_contig_688 A15_contig_688_559 565179 566441 - GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme A15_contig_688 A15_contig_688_560 566458 567765 - GH29
TC A15_contig_688 A15_contig_688_561 567802 568656 - 3.A.1.1.47
TC A15_contig_688 A15_contig_688_562 568672 569604 - 3.A.1.1.47
TC A15_contig_688 A15_contig_688_563 569678 570988 - 3.A.1.1.47
TC A15_contig_688 A15_contig_688_564 571200 572471 - 3.A.1.1.47
Gene ID: A15_contig_688_556
Type: TC
Location: 560587 - 561555 (-)
Gene ID: A15_contig_688_557
Type: TC
Location: 561922 - 562503 (-)
Gene ID: A15_contig_688_558
Type: CAZyme
Location: 562879 - 565107 (-)
Gene ID: A15_contig_688_559
Type: pfam
Location: 565179 - 566441 (-)
Gene ID: A15_contig_688_560
Type: CAZyme
Location: 566458 - 567765 (-)
Gene ID: A15_contig_688_561
Type: TC
Location: 567802 - 568656 (-)
Gene ID: A15_contig_688_562
Type: TC
Location: 568672 - 569604 (-)
Gene ID: A15_contig_688_563
Type: TC
Location: 569678 - 570988 (-)
Gene ID: A15_contig_688_564
Type: TC
Location: 571200 - 572471 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A15_contig_688_556 vegetarian > vegan 1.03506 0.00181
A15_contig_688_559 vegetarian > vegan 1.66440 0.00181
A15_contig_688_562 vegetarian > vegan 1.57920 0.00181
A15_contig_688_564 vegetarian > vegan 1.67439 0.00181

🧭 Explore Read Mapping of CGC

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