Cluster: A15.CMAG_2_CGC32
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A15.CMAG_2
- CGC Family ID: CGCFAM_00411
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A15_contig_688 | A15_contig_688_2455 | 2610132 | 2611052 | + | 9.A.40.2.2 |
| peptidase | A15_contig_688 | A15_contig_688_2456 | 2611146 | 2611874 | + | M20.UNW |
| CAZyme | A15_contig_688 | A15_contig_688_2457 | 2612017 | 2613474 | + | GT5 |
| peptidase | A15_contig_688 | A15_contig_688_2458 | 2613557 | 2614252 | + | S14.UPW |
| pfam | A15_contig_688 | A15_contig_688_2459 | 2614366 | 2615271 | + | BacA |
| TC | A15_contig_688 | A15_contig_688_2460 | 2615295 | 2617973 | + | 3.A.12.1.1 |
Gene ID: A15_contig_688_2455
Type: TC
Location: 2610132 - 2611052 (+)
Type: TC
Location: 2610132 - 2611052 (+)
Gene ID: A15_contig_688_2456
Type: peptidase
Location: 2611146 - 2611874 (+)
Type: peptidase
Location: 2611146 - 2611874 (+)
Gene ID: A15_contig_688_2457
Type: CAZyme
Location: 2612017 - 2613474 (+)
Type: CAZyme
Location: 2612017 - 2613474 (+)
Gene ID: A15_contig_688_2458
Type: peptidase
Location: 2613557 - 2614252 (+)
Type: peptidase
Location: 2613557 - 2614252 (+)
Gene ID: A15_contig_688_2459
Type: pfam
Location: 2614366 - 2615271 (+)
Type: pfam
Location: 2614366 - 2615271 (+)
Gene ID: A15_contig_688_2460
Type: TC
Location: 2615295 - 2617973 (+)
Type: TC
Location: 2615295 - 2617973 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia inulinivorans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.