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Cluster: A15.CMAG_2_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A15_contig_688 A15_contig_688_1591 1653912 1655357 + GT2
NULL(UNKNOWN) A15_contig_688 A15_contig_688_1592 1655486 1655695 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A15_contig_688 A15_contig_688_1593 1655705 1656652 + GT2
TC A15_contig_688 A15_contig_688_1594 1656808 1658226 + 9.B.18.1.1
pfam A15_contig_688 A15_contig_688_1595 1658240 1659364 + LytR_cpsA_psr
CAZyme A15_contig_688 A15_contig_688_1596 1659365 1660423 + GT2
CAZyme A15_contig_688 A15_contig_688_1597 1660416 1661393 + GT2
Gene ID: A15_contig_688_1591
Type: CAZyme
Location: 1653912 - 1655357 (+)
Gene ID: A15_contig_688_1592
Type:
Location: 1655486 - 1655695 (+)
Gene ID: A15_contig_688_1593
Type: CAZyme
Location: 1655705 - 1656652 (+)
Gene ID: A15_contig_688_1594
Type: TC
Location: 1656808 - 1658226 (+)
Gene ID: A15_contig_688_1595
Type: pfam
Location: 1658240 - 1659364 (+)
Gene ID: A15_contig_688_1596
Type: CAZyme
Location: 1659365 - 1660423 (+)
Gene ID: A15_contig_688_1597
Type: CAZyme
Location: 1660416 - 1661393 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A15_contig_688_1593 vegetarian > vegan 2.05869 0.00181
A15_contig_688_1594 vegetarian > vegan 1.24421 0.00181
A15_contig_688_1596 vegetarian > vegan 1.05820 0.00181
A15_contig_688_1597 vegetarian > vegan 1.30995 0.00181

🧭 Explore Read Mapping of CGC

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