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Cluster: A15.CMAG_2_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A15_contig_688 A15_contig_688_1502 1547499 1549361 + 9.B.18.2.1
NULL(UNKNOWN) A15_contig_688 A15_contig_688_1503 1549316 1549498 + NULL(UNKNOWN)
[View Structural Homologs]
pfam A15_contig_688 A15_contig_688_1504 1549467 1551356 + DUF2142
TC A15_contig_688 A15_contig_688_1505 1551385 1552011 + 9.B.18.1.3
pfam A15_contig_688 A15_contig_688_1506 1552060 1552941 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
pfam A15_contig_688 A15_contig_688_1507 1552938 1553849 + Metallophos
CAZyme A15_contig_688 A15_contig_688_1508 1553862 1554680 + GT2
CAZyme A15_contig_688 A15_contig_688_1509 1554772 1555884 + GT4
CAZyme A15_contig_688 A15_contig_688_1510 1555881 1556855 + GT2
pfam A15_contig_688 A15_contig_688_1511 1556852 1558246 + DUF6032
CAZyme A15_contig_688 A15_contig_688_1512 1558243 1559208 + GT2
CAZyme A15_contig_688 A15_contig_688_1513 1559213 1560409 + GT4
pfam A15_contig_688 A15_contig_688_1514 1560387 1561922 + Polysacc_synt
pfam A15_contig_688 A15_contig_688_1515 1561922 1563043 + PS_pyruv_trans
CAZyme A15_contig_688 A15_contig_688_1516 1563040 1563951 + GT2
Gene ID: A15_contig_688_1502
Type: TC
Location: 1547499 - 1549361 (+)
Gene ID: A15_contig_688_1503
Type:
Location: 1549316 - 1549498 (+)
Gene ID: A15_contig_688_1504
Type: pfam
Location: 1549467 - 1551356 (+)
Gene ID: A15_contig_688_1505
Type: TC
Location: 1551385 - 1552011 (+)
Gene ID: A15_contig_688_1506
Type: pfam
Location: 1552060 - 1552941 (+)
Gene ID: A15_contig_688_1507
Type: pfam
Location: 1552938 - 1553849 (+)
Gene ID: A15_contig_688_1508
Type: CAZyme
Location: 1553862 - 1554680 (+)
Gene ID: A15_contig_688_1509
Type: CAZyme
Location: 1554772 - 1555884 (+)
Gene ID: A15_contig_688_1510
Type: CAZyme
Location: 1555881 - 1556855 (+)
Gene ID: A15_contig_688_1511
Type: pfam
Location: 1556852 - 1558246 (+)
Gene ID: A15_contig_688_1512
Type: CAZyme
Location: 1558243 - 1559208 (+)
Gene ID: A15_contig_688_1513
Type: CAZyme
Location: 1559213 - 1560409 (+)
Gene ID: A15_contig_688_1514
Type: pfam
Location: 1560387 - 1561922 (+)
Gene ID: A15_contig_688_1515
Type: pfam
Location: 1561922 - 1563043 (+)
Gene ID: A15_contig_688_1516
Type: CAZyme
Location: 1563040 - 1563951 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A15_contig_688_1503 vegetarian > vegan 1.69931 0.00181
A15_contig_688_1504 vegetarian > vegan 1.26430 0.00181
A15_contig_688_1506 vegetarian > vegan 1.46711 0.00181
A15_contig_688_1508 vegetarian > vegan 1.17622 0.00181
A15_contig_688_1509 vegetarian > vegan 1.58943 0.00181

🧭 Explore Read Mapping of CGC

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