Cluster: A15.CMAG_2_CGC21
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: A15.CMAG_2
- CGC Family ID: CGCFAM_00064
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A15_contig_688 | A15_contig_688_1495 | 1538343 | 1539173 | + | 3.A.1.104.1 |
| TC | A15_contig_688 | A15_contig_688_1496 | 1539186 | 1540451 | + | 3.A.1.103.6 |
| CAZyme | A15_contig_688 | A15_contig_688_1497 | 1540520 | 1543534 | + | GT2 | GT2 |
Gene ID: A15_contig_688_1495
Type: TC
Location: 1538343 - 1539173 (+)
Type: TC
Location: 1538343 - 1539173 (+)
Gene ID: A15_contig_688_1496
Type: TC
Location: 1539186 - 1540451 (+)
Type: TC
Location: 1539186 - 1540451 (+)
Gene ID: A15_contig_688_1497
Type: CAZyme
Location: 1540520 - 1543534 (+)
Type: CAZyme
Location: 1540520 - 1543534 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia inulinivorans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A15_contig_688_1497 | vegetarian > vegan | 1.48197 | 0.00181 |