Cluster: A15.CMAG_2_CGC35
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A15.CMAG_2
- CGC Family ID: CGCFAM_01851
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A15_contig_688 | A15_contig_688_2774 | 2909162 | 2910277 | - | GT111 |
| pfam | A15_contig_688 | A15_contig_688_2775 | 2910323 | 2911282 | - | Ldh_1_N | Ldh_1_C |
| pfam | A15_contig_688 | A15_contig_688_2776 | 2911771 | 2912967 | + | IMS | IMS_C |
| TC | A15_contig_688 | A15_contig_688_2777 | 2912964 | 2914817 | - | 3.A.1.135.6 |
| TC | A15_contig_688 | A15_contig_688_2778 | 2914810 | 2916978 | - | 3.A.1.135.6 |
Gene ID: A15_contig_688_2774
Type: CAZyme
Location: 2909162 - 2910277 (-)
Type: CAZyme
Location: 2909162 - 2910277 (-)
Gene ID: A15_contig_688_2775
Type: pfam
Location: 2910323 - 2911282 (-)
Type: pfam
Location: 2910323 - 2911282 (-)
Gene ID: A15_contig_688_2776
Type: pfam
Location: 2911771 - 2912967 (+)
Type: pfam
Location: 2911771 - 2912967 (+)
Gene ID: A15_contig_688_2777
Type: TC
Location: 2912964 - 2914817 (-)
Type: TC
Location: 2912964 - 2914817 (-)
Gene ID: A15_contig_688_2778
Type: TC
Location: 2914810 - 2916978 (-)
Type: TC
Location: 2914810 - 2916978 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia inulinivorans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A15_contig_688_2776 | vegetarian > vegan | 1.15978 | 0.00181 |