CGCs
Total: 123241 Gene Clusters| Cluster ID ↑ | CGC Family | Total Gene Count | CAZyme Gene Count | Substrate | CAZymes | Continent |
|---|---|---|---|---|---|---|
| ShaoY_2019_ERR3405274_bin.1_CGC60 | — | 9 | 1 | — |
GH2
Galactomannan (fungi), Arabinan, Beta-galactoside, Beta-glucoside, Beta-glucuronoside, Beta-mannoside, Chitosan or chitosan oligosaccharides (nonacetylated chitin), N-glycan (plant), Pectin (rhamnogalacturonan ii), Beta-xyloside
|
Europe |
| ShaoY_2019_ERR3405274_bin.1_CGC61 | CGCFAM_00276 | 4 | 2 | — |
GH170
Peptidoglycan
GH2
Galactomannan (fungi), Arabinan, Beta-galactoside, Beta-glucoside, Beta-glucuronoside, Beta-mannoside, Chitosan or chitosan oligosaccharides (nonacetylated chitin), N-glycan (plant), Pectin (rhamnogalacturonan ii), Beta-xyloside
|
Europe |
| ShaoY_2019_ERR3405274_bin.1_CGC62 | CGCFAM_00012 | 4 | 1 | host glycan beta-glucan |
GH1
Strictosidine (monoterpene indole alkaloids), Beta-fucosides, Beta-galactoside, 6-phospho-beta-galactoside, Beta-glucan, Beta-glucoside, 6-phospho-beta-glucoside, Ceramide b-galactosidase, Beta-glucuronoside, Beta-mannoside, Glc-conjugated aba (plant), Raucaffricine (glucoalkaloid), Lactose in milk, phlorizin (polyphenols) in fruit, Rutin (polyphenol), Amygdalin (cyanogenic glycosides), Prunasin (cyanogenic glycosides), Vicianin (cyanogenic glycosides), Glucosinolates (sulfur-containing phytochemicals), Beta-primeverosides (tea plant phytochemicals), Daidzin and genistin, furcatin (polyphenol), Dimboa glucoside (polyphenol), Furostanol (polyphenol), Phlorizin (polyphenols) in fruit, Isoflavone, Rutin, beta-xyloside
|
Europe |
| ShaoY_2019_ERR3405274_bin.1_CGC63 | CGCFAM_05706 | 22 | 7 | — |
GH94
Acholetin, Laminarin, 1, 2-beta-oligoglucan, Cellobiose, Cellobionic acid, Cellodextrin, 4-o-beta--glucosyl-galactose, Chitin
CE1
Hydroxycinnamic acids(phenolic acids), Trehalose, Acyl-coa, Palmitoyl-coa and other long-chain acyl-coas(ester), Xylan, Feruloyl-polysaccharide(esterified sugar)
GH3
Arabinan, arabinoxylan, Avenacin, Beta-1, 3-1, 4-glucan (laminarin, lichenin and cereal d-glucans), Beta-glucan, 3-glucan (laminarin, Cellodextrin (beta-1, 3-glucan), Chitin, peptidoglycan, Glycosphingolipid (host glycan), Peptidoglycan, Coniferin (glucoside of coniferyl alcohol), Protodioscin (plant steroidal saponin), Xylan, Xyloglucan (plant)
GH35
Beta-galactoside, Chitosan, chitin, Galactan and arabinogalactan
GH144
Beta-1, 2-glucan (bacteria)
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
|
Europe |
| ShaoY_2019_ERR3405274_bin.1_CGC64 | — | 7 | 1 | — |
GH39
Beta-galactoside, Beta-glucoside (exopolysaccharide, cellubiose), Beta-glucoside (cellubiose), Glycosaminoglycans heparan sulfate and dermatan sulfate (host glycan), Xylan
|
Europe |
| ShaoY_2019_ERR3405274_bin.1_CGC65 | — | 13 | 4 | — |
GH36
Alpha-galactoside (galactose oligosaccharides, galactomannans and galactolipid), Acetylgalactosamine (human blood group a and b, mucin glycoproteins), Raffinose/stachyose oligosaccharides (plant seeds), Raffinose oligosaccharides
CE17
Acetylmannan
CE2
Acetylxylan
GH130
Mannooligosaccharides, Beta-mannan
|
Europe |
| ShaoY_2019_ERR3405274_bin.1_CGC66 | — | 3 | 1 | — |
GH23
Chitin, Peptidoglycan
|
Europe |
| ShaoY_2019_ERR3405274_bin.1_CGC7 | CGCFAM_05354 | 14 | 1 | — |
CE9
Host glycan
|
Europe |
| ShaoY_2019_ERR3405274_bin.1_CGC9 | CGCFAM_00020 | 6 | 1 | host glycan beta-glucan |
GH1
Strictosidine (monoterpene indole alkaloids), Beta-fucosides, Beta-galactoside, 6-phospho-beta-galactoside, Beta-glucan, Beta-glucoside, 6-phospho-beta-glucoside, Ceramide b-galactosidase, Beta-glucuronoside, Beta-mannoside, Glc-conjugated aba (plant), Raucaffricine (glucoalkaloid), Lactose in milk, phlorizin (polyphenols) in fruit, Rutin (polyphenol), Amygdalin (cyanogenic glycosides), Prunasin (cyanogenic glycosides), Vicianin (cyanogenic glycosides), Glucosinolates (sulfur-containing phytochemicals), Beta-primeverosides (tea plant phytochemicals), Daidzin and genistin, furcatin (polyphenol), Dimboa glucoside (polyphenol), Furostanol (polyphenol), Phlorizin (polyphenols) in fruit, Isoflavone, Rutin, beta-xyloside
|
Europe |
| ShaoY_2019_ERR3405525_bin.6_CGC1 | — | 6 | 2 | — |
CE4
Chitooligosaccharides, Chitin, Peptidoglycan, Acetylxylan
GT9
|
Europe |
| ShaoY_2019_ERR3405525_bin.6_CGC10 | — | 5 | 1 | — |
GH18
Chitooligosaccharides (symbiotic nitrogen-fixing bacteria), Chitin, N-glycan (host glycan), Peptidoglycan
|
Europe |
| ShaoY_2019_ERR3405525_bin.6_CGC2 | — | 4 | 1 | — |
GT83
|
Europe |
| ShaoY_2019_ERR3405525_bin.6_CGC3 | — | 3 | 2 | — |
GT30
GT19
|
Europe |
| ShaoY_2019_ERR3405525_bin.6_CGC4 | — | 6 | 1 | — |
CE4
Chitooligosaccharides, Chitin, Peptidoglycan, Acetylxylan
|
Europe |
| ShaoY_2019_ERR3405525_bin.6_CGC5 | — | 17 | 1 | — |
GT51
|
Europe |
| ShaoY_2019_ERR3405525_bin.6_CGC6 | — | 7 | 1 | — |
GT83
|
Europe |
| ShaoY_2019_ERR3405525_bin.6_CGC7 | — | 5 | 1 | — |
GH3
Arabinan, arabinoxylan, Avenacin, Beta-1, 3-1, 4-glucan (laminarin, lichenin and cereal d-glucans), Beta-glucan, 3-glucan (laminarin, Cellodextrin (beta-1, 3-glucan), Chitin, peptidoglycan, Glycosphingolipid (host glycan), Peptidoglycan, Coniferin (glucoside of coniferyl alcohol), Protodioscin (plant steroidal saponin), Xylan, Xyloglucan (plant)
|
Europe |
| ShaoY_2019_ERR3405525_bin.6_CGC8 | CGCFAM_00394 | 17 | 1 | — |
GT28
|
Europe |
| ShaoY_2019_ERR3405525_bin.6_CGC9 | — | 3 | 1 | — |
GT28
|
Europe |
| ShaoY_2019_ERR3405591_bin.6_CGC10 | — | 10 | 1 | — |
CBM50
Chitin or peptidoglycan
|
Europe |