Cluster: ShaoY_2019_ERR3405525_bin.6_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405525_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405525_bin.6_k141_3101 | ShaoY_2019_ERR3405525_bin.6_k141_3101_263 | 299815 | 300801 | + | 9.B.146.1.6 |
| pfam | ShaoY_2019_ERR3405525_bin.6_k141_3101 | ShaoY_2019_ERR3405525_bin.6_k141_3101_264 | 300885 | 302255 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| CAZyme | ShaoY_2019_ERR3405525_bin.6_k141_3101 | ShaoY_2019_ERR3405525_bin.6_k141_3101_265 | 302255 | 303364 | + | GT28 |
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_3101_263
Type: TC
Location: 299815 - 300801 (+)
Type: TC
Location: 299815 - 300801 (+)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_3101_264
Type: pfam
Location: 300885 - 302255 (+)
Type: pfam
Location: 300885 - 302255 (+)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_3101_265
Type: CAZyme
Location: 302255 - 303364 (+)
Type: CAZyme
Location: 302255 - 303364 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp900550175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.