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Cluster: ShaoY_2019_ERR3405525_bin.6_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405525_bin.6_k141_2322 ShaoY_2019_ERR3405525_bin.6_k141_2322_118 126226 129813 - 3.A.1.129.1
TC ShaoY_2019_ERR3405525_bin.6_k141_2322 ShaoY_2019_ERR3405525_bin.6_k141_2322_119 130009 131028 - 3.D.4.3.2
TC ShaoY_2019_ERR3405525_bin.6_k141_2322 ShaoY_2019_ERR3405525_bin.6_k141_2322_120 131019 132407 - 3.D.4.3.2
TF ShaoY_2019_ERR3405525_bin.6_k141_2322 ShaoY_2019_ERR3405525_bin.6_k141_2322_121 132471 132923 - Rrf2
pfam ShaoY_2019_ERR3405525_bin.6_k141_2322 ShaoY_2019_ERR3405525_bin.6_k141_2322_122 133144 133638 - MoCF_biosynth
CAZyme ShaoY_2019_ERR3405525_bin.6_k141_2322 ShaoY_2019_ERR3405525_bin.6_k141_2322_123 133647 134507 - CE4
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_2322_118
Type: TC
Location: 126226 - 129813 (-)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_2322_119
Type: TC
Location: 130009 - 131028 (-)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_2322_120
Type: TC
Location: 131019 - 132407 (-)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_2322_121
Type: TF
Location: 132471 - 132923 (-)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_2322_122
Type: pfam
Location: 133144 - 133638 (-)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_2322_123
Type: CAZyme
Location: 133647 - 134507 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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