Cluster: ShaoY_2019_ERR3405525_bin.6_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405525_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405525_bin.6_k141_1602 | ShaoY_2019_ERR3405525_bin.6_k141_1602_7 | 4415 | 5125 | + | 1.C.82.1.1 |
| pfam | ShaoY_2019_ERR3405525_bin.6_k141_1602 | ShaoY_2019_ERR3405525_bin.6_k141_1602_8 | 5300 | 5797 | + | Ribosomal_L10 |
| pfam | ShaoY_2019_ERR3405525_bin.6_k141_1602 | ShaoY_2019_ERR3405525_bin.6_k141_1602_9 | 5868 | 6236 | + | Ribosomal_L12 | Ribosomal_L12_N |
| CAZyme | ShaoY_2019_ERR3405525_bin.6_k141_1602 | ShaoY_2019_ERR3405525_bin.6_k141_1602_10 | 6285 | 7925 | - | GT83 |
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_1602_7
Type: TC
Location: 4415 - 5125 (+)
Type: TC
Location: 4415 - 5125 (+)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_1602_8
Type: pfam
Location: 5300 - 5797 (+)
Type: pfam
Location: 5300 - 5797 (+)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_1602_9
Type: pfam
Location: 5868 - 6236 (+)
Type: pfam
Location: 5868 - 6236 (+)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_1602_10
Type: CAZyme
Location: 6285 - 7925 (-)
Type: CAZyme
Location: 6285 - 7925 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp900550175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.