Cluster: ShaoY_2019_ERR3405525_bin.6_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405525_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405525_bin.6_k141_2886 | ShaoY_2019_ERR3405525_bin.6_k141_2886_31 | 28731 | 29810 | - | 9.B.124.1.7 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405525_bin.6_k141_2886 | ShaoY_2019_ERR3405525_bin.6_k141_2886_32 | 29976 | 30767 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405525_bin.6_k141_2886 | ShaoY_2019_ERR3405525_bin.6_k141_2886_33 | 31018 | 31791 | - | 3.A.1.16.3 |
| TC | ShaoY_2019_ERR3405525_bin.6_k141_2886 | ShaoY_2019_ERR3405525_bin.6_k141_2886_34 | 31803 | 32555 | - | 3.A.1.17.1 |
| TC | ShaoY_2019_ERR3405525_bin.6_k141_2886 | ShaoY_2019_ERR3405525_bin.6_k141_2886_35 | 32566 | 33519 | - | 3.A.1.17.4 |
| CAZyme | ShaoY_2019_ERR3405525_bin.6_k141_2886 | ShaoY_2019_ERR3405525_bin.6_k141_2886_36 | 33860 | 35488 | - | GT83 |
| TC | ShaoY_2019_ERR3405525_bin.6_k141_2886 | ShaoY_2019_ERR3405525_bin.6_k141_2886_37 | 35499 | 36086 | - | 9.B.27.2.5 |
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_2886_31
Type: TC
Location: 28731 - 29810 (-)
Type: TC
Location: 28731 - 29810 (-)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_2886_32
Type:
Location: 29976 - 30767 (-)
Type:
Location: 29976 - 30767 (-)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_2886_33
Type: TC
Location: 31018 - 31791 (-)
Type: TC
Location: 31018 - 31791 (-)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_2886_34
Type: TC
Location: 31803 - 32555 (-)
Type: TC
Location: 31803 - 32555 (-)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_2886_35
Type: TC
Location: 32566 - 33519 (-)
Type: TC
Location: 32566 - 33519 (-)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_2886_36
Type: CAZyme
Location: 33860 - 35488 (-)
Type: CAZyme
Location: 33860 - 35488 (-)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_2886_37
Type: TC
Location: 35499 - 36086 (-)
Type: TC
Location: 35499 - 36086 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp900550175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.