PROTEIN: ShaoY_2019_ERR3405525_bin.6_k141_2886_32
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405525_bin.6_k141_2886_32.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405525_bin.6_k141_2886_32
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Protein Sequence
MSLFELEKIL FFDEYIGSFE TERVEKVRGF VDWLSQYSGS LVHNPWGEVN PDLEIVTKGF 60 DAAQVRRDNL VAYLLPRLGR AKVFVVAEAV GYQGGRFTGI AITCERMLLD KHKTIRAKDV 120 TPIQLERTSS PTSSLLKGTQ QKDGFNEPTD TVVWSAIVEK GINTYDTLLW NIFPFHPHKD 180 GNPLTNRTPT DREQQVGWEY TKRLLDLHFE LGGVEPLMLA VGQKSADTMG KFGLSAIGLR 240 HPANGGANLY RQGFAEAVDT YLR 263
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9VEM1-F1-model_v4 | 13 | 263 | 12 | 280 | 0.6476 |
0.7195 |
| AF-Q53HV7-F1-model_v4 | 20 | 263 | 24 | 266 | 0.6473 |
0.7297 |
| AF-Q811Q1-F1-model_v4 | 20 | 263 | 23 | 266 | 0.6403 |
0.728 |
| AF-A0A2R8PW02-F1-model_v4 | 20 | 263 | 34 | 277 | 0.6387 |
0.7284 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5h93-assembly1.cif.gz_A | 26 | 263 | 1 | 232 | 0.6766 |
0.7432 |
| 5h93-assembly3.cif.gz_C | 26 | 263 | 1 | 229 | 0.6765 |
0.7477 |
| 5h93-assembly2.cif.gz_B | 25 | 263 | 1 | 231 | 0.6734 |
0.7423 |
| 5h99-assembly1.cif.gz_A | 23 | 263 | 1 | 228 | 0.6691 |
0.7404 |
| 5h93-assembly4.cif.gz_D | 25 | 263 | 1 | 236 | 0.6673 |
0.7292 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q53HV7-F1-model_v4 | 20 | 263 | 24 | 266 | 0.6473 |
0.7297 |
| AF-Q59I47-F1-model_v4 | 20 | 263 | 25 | 268 | 0.6454 |
0.727 |
| AF-Q811Q1-F1-model_v4 | 20 | 263 | 23 | 266 | 0.6403 |
0.728 |
| AF-Q9YGN6-F1-model_v4 | 20 | 263 | 35 | 279 | 0.6333 |
0.723 |