Cluster: ShaoY_2019_ERR3405525_bin.6_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405525_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405525_bin.6_k141_3101 | ShaoY_2019_ERR3405525_bin.6_k141_3101_413 | 451638 | 452885 | + | 3.A.11.1.3 |
| TC | ShaoY_2019_ERR3405525_bin.6_k141_3101 | ShaoY_2019_ERR3405525_bin.6_k141_3101_414 | 452875 | 455244 | + | 3.A.7.7.1 |
| STP | ShaoY_2019_ERR3405525_bin.6_k141_3101 | ShaoY_2019_ERR3405525_bin.6_k141_3101_415 | 455237 | 456553 | + | Pyr_redox_2 |
| pfam | ShaoY_2019_ERR3405525_bin.6_k141_3101 | ShaoY_2019_ERR3405525_bin.6_k141_3101_416 | 456677 | 457501 | - | LGT |
| CAZyme | ShaoY_2019_ERR3405525_bin.6_k141_3101 | ShaoY_2019_ERR3405525_bin.6_k141_3101_417 | 457655 | 459259 | + | GH18 |
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_3101_413
Type: TC
Location: 451638 - 452885 (+)
Type: TC
Location: 451638 - 452885 (+)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_3101_414
Type: TC
Location: 452875 - 455244 (+)
Type: TC
Location: 452875 - 455244 (+)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_3101_415
Type: STP
Location: 455237 - 456553 (+)
Type: STP
Location: 455237 - 456553 (+)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_3101_416
Type: pfam
Location: 456677 - 457501 (-)
Type: pfam
Location: 456677 - 457501 (-)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_3101_417
Type: CAZyme
Location: 457655 - 459259 (+)
Type: CAZyme
Location: 457655 - 459259 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp900550175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.