Cluster: ShaoY_2019_ERR3405525_bin.6_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405525_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405525_bin.6_k141_2886 | ShaoY_2019_ERR3405525_bin.6_k141_2886_102 | 106038 | 107588 | - | 2.A.49.3.3 |
| pfam | ShaoY_2019_ERR3405525_bin.6_k141_2886 | ShaoY_2019_ERR3405525_bin.6_k141_2886_103 | 107805 | 108956 | - | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| CAZyme | ShaoY_2019_ERR3405525_bin.6_k141_2886 | ShaoY_2019_ERR3405525_bin.6_k141_2886_104 | 109162 | 110310 | - | GH3 |
| pfam | ShaoY_2019_ERR3405525_bin.6_k141_2886 | ShaoY_2019_ERR3405525_bin.6_k141_2886_105 | 110511 | 110744 | - | Fer2_BFD |
| TC | ShaoY_2019_ERR3405525_bin.6_k141_2886 | ShaoY_2019_ERR3405525_bin.6_k141_2886_106 | 110984 | 111616 | - | 9.B.149.1.11 |
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_2886_102
Type: TC
Location: 106038 - 107588 (-)
Type: TC
Location: 106038 - 107588 (-)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_2886_103
Type: pfam
Location: 107805 - 108956 (-)
Type: pfam
Location: 107805 - 108956 (-)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_2886_104
Type: CAZyme
Location: 109162 - 110310 (-)
Type: CAZyme
Location: 109162 - 110310 (-)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_2886_105
Type: pfam
Location: 110511 - 110744 (-)
Type: pfam
Location: 110511 - 110744 (-)
Gene ID: ShaoY_2019_ERR3405525_bin.6_k141_2886_106
Type: TC
Location: 110984 - 111616 (-)
Type: TC
Location: 110984 - 111616 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp900550175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.