y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g010415m |
Family | GH14 |
Protein Properties | Length: 512 Molecular Weight: 57932.8 Isoelectric Point: 5.2544 |
Chromosome | Chromosome/Scaffold: 00001 Start: 1928831 End: 1934261 |
Description | beta-amylase 6 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 114 | 332 | 0 |
YVMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIVEAHTPQVYNWSGYRRLFQIVRELELKLQVVMSFHECGGNVGDDVHIPLPQWVMEI GQNNPEIYFTDREGRRNSECLTWGIDKERVLRGRTAVEVYFDYMRSFRVEFNEFFVDGIIAEIEVGLGPCGELRYPTYPAKHGWKYPGIGEFQCYDKYLM KSLSKAAEARGHLFWARGP | |||
GH14 | 337 | 480 | 0 |
TCISAKLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCY DREGYNKILENAKPLNDPDGRHLSAFTYLRLSPVLTDGHNFIEF |
Full Sequence |
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Protein Sequence Length: 512 Download |
MAISSTQFCD ILRAPGASSP ITSSLSHKQT LFTSQRVPVT FHSLTYCNVT YCNACRFKRT 60 QFRTLAAIGE WEEETEDDPH GGDSVDAADD MKAVHLPPKL PERDFAGTPY VPVYVMLPLG 120 IIDMNCELVD PEILVNQLKI LKSINVDGVM VDCWWGIVEA HTPQVYNWSG YRRLFQIVRE 180 LELKLQVVMS FHECGGNVGD DVHIPLPQWV MEIGQNNPEI YFTDREGRRN SECLTWGIDK 240 ERVLRGRTAV EVYFDYMRSF RVEFNEFFVD GIIAEIEVGL GPCGELRYPT YPAKHGWKYP 300 GIGEFQCYDK YLMKSLSKAA EARGHLFWAR GPAFEGTCIS AKLSGIHWWY KTASHAAELT 360 AGFYNPSNRD GYAPIAAMLK KHGVALNFTC VELRTVDQHE DFPEALADPE GLVWQVLNAA 420 WDVSILVASE NALPCYDREG YNKILENAKP LNDPDGRHLS AFTYLRLSPV LTDGHNFIEF 480 ERFVKRMHGE AVPDLRVYTT EGNKEECSKN Q* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02801 | PLN02801 | 5.0e-104 | 110 | 328 | 219 | + beta-amylase | ||
PLN00197 | PLN00197 | 2.0e-124 | 111 | 487 | 436 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 2.0e-143 | 111 | 494 | 443 | + beta-amylase | ||
PLN02905 | PLN02905 | 0 | 13 | 497 | 555 | + beta-amylase | ||
PLN02705 | PLN02705 | 0 | 83 | 495 | 464 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40368.1 | 0 | 60 | 497 | 169 | 657 | unnamed protein product [Vitis vinifera] |
EMBL | CBI40370.1 | 0 | 73 | 499 | 78 | 550 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274612.1 | 0 | 97 | 499 | 123 | 576 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002320794.1 | 0 | 104 | 489 | 1 | 437 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511858.1 | 0 | 1 | 490 | 1 | 534 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1byd_A | 0 | 110 | 490 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1byc_A | 0 | 110 | 490 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1byb_A | 0 | 110 | 490 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bya_A | 0 | 110 | 490 | 11 | 444 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
PDB | 1wdp_A | 0 | 110 | 490 | 11 | 444 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EH764943 | 241 | 92 | 332 | 0 |
HO064443 | 240 | 99 | 338 | 0 |
DV021150 | 292 | 196 | 436 | 0 |
DV466053 | 277 | 271 | 496 | 0 |
DT743760 | 219 | 119 | 337 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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