y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G185700.2 |
Family | GH14 |
Protein Properties | Length: 401 Molecular Weight: 44026.2 Isoelectric Point: 5.7804 |
Chromosome | Chromosome/Scaffold: 11 Start: 44204602 End: 44207725 |
Description | beta-amylase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 2 | 359 | 0 |
GKYDWSGYLAVAEMVQKAGLKLHVSLCFHASSQPRIPLPKWVTKIGESQSSIFFADRSGQHYQQCLSLAVDDLAVLDGKTPVQVYQGFCESFKSTFSPFI GSTITGISMGLGPDGELRYPSHHKPAKSGTITGVGEFQCYDTNMLNLLKQYAEANGNPLWGLGGPHDAPTYDQAPNLNSFFKDHGGSWESPYGDFFLSWY SSELVSHGNRLLSLASSIFGDTEVNVYGKVPLMHSWYKTRAHPSELTAGFYNTASRNGYEAVAEMFARNSCKIILPGMDLSDEHQPHDSLSSPESLLAQI RTTCNKHRVEVAGQNLASGAPGGLEQIKKNMLGENPIDLFTYQRMGAHFFSPEHFPSF |
Full Sequence |
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Protein Sequence Length: 401 Download |
MGKYDWSGYL AVAEMVQKAG LKLHVSLCFH ASSQPRIPLP KWVTKIGESQ SSIFFADRSG 60 QHYQQCLSLA VDDLAVLDGK TPVQVYQGFC ESFKSTFSPF IGSTITGISM GLGPDGELRY 120 PSHHKPAKSG TITGVGEFQC YDTNMLNLLK QYAEANGNPL WGLGGPHDAP TYDQAPNLNS 180 FFKDHGGSWE SPYGDFFLSW YSSELVSHGN RLLSLASSIF GDTEVNVYGK VPLMHSWYKT 240 RAHPSELTAG FYNTASRNGY EAVAEMFARN SCKIILPGMD LSDEHQPHDS LSSPESLLAQ 300 IRTTCNKHRV EVAGQNLASG APGGLEQIKK NMLGENPIDL FTYQRMGAHF FSPEHFPSFT 360 EFVRSLSQPE LHPDDLPSDE AEATESVQTS SDPNIHLQTA * 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 9.0e-72 | 3 | 366 | 380 | + beta-amylase | ||
PLN02801 | PLN02801 | 2.0e-79 | 2 | 366 | 382 | + beta-amylase | ||
PLN02161 | PLN02161 | 2.0e-84 | 4 | 367 | 378 | + beta-amylase | ||
PLN00197 | PLN00197 | 5.0e-90 | 2 | 390 | 407 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 2.0e-98 | 2 | 385 | 394 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD38148.1 | 0 | 1 | 400 | 52 | 450 | AF139501_1 beta-amylase [Prunus armeniaca] |
EMBL | CAI39245.1 | 0 | 1 | 400 | 137 | 536 | beta-amylase [Glycine max] |
EMBL | CAN66037.1 | 0 | 1 | 400 | 138 | 541 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002276777.1 | 0 | 1 | 400 | 138 | 541 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002516865.1 | 0 | 1 | 400 | 144 | 545 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fa2_A | 0 | 3 | 391 | 67 | 463 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
PDB | 1v3i_A | 0 | 3 | 366 | 66 | 441 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 1q6g_A | 0 | 3 | 366 | 66 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
PDB | 1q6d_A | 0 | 3 | 366 | 66 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
PDB | 1wds_A | 0 | 3 | 366 | 66 | 441 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO121797 | 283 | 115 | 397 | 0 |
ES829862 | 295 | 107 | 401 | 0 |
HO781436 | 403 | 1 | 401 | 0 |
CO103897 | 279 | 53 | 331 | 0 |
HO796964 | 392 | 12 | 401 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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