y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_24.44 |
Family | GH14 |
Protein Properties | Length: 254 Molecular Weight: 29254.9 Isoelectric Point: 6.7062 |
Chromosome | Chromosome/Scaffold: 24 Start: 967947 End: 970762 |
Description | beta-amylase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 1 | 210 | 0 |
MQCYDKYLQQNLQKAAKLRGHSFWARGPDNSGQYNSLPHETGFFCERGDYDSYYGRFFLHWYSQSLIEHADNVLSLASLAFEETRIIVKVPAVYWWYKTT SHAAELTAGYYNPTNQEGYAPVFEVLKKYSVIMKFVCPGLQMSTENYEQLADPEGLSWQVLNSAWDRGLTVAGENALSCYDREGCMRIVEMAKPRNDPDR RHFSFFTYQQ |
Full Sequence |
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Protein Sequence Length: 254 Download |
MQCYDKYLQQ NLQKAAKLRG HSFWARGPDN SGQYNSLPHE TGFFCERGDY DSYYGRFFLH 60 WYSQSLIEHA DNVLSLASLA FEETRIIVKV PAVYWWYKTT SHAAELTAGY YNPTNQEGYA 120 PVFEVLKKYS VIMKFVCPGL QMSTENYEQL ADPEGLSWQV LNSAWDRGLT VAGENALSCY 180 DREGCMRIVE MAKPRNDPDR RHFSFFTYQQ PTPLVQGTIC FSDLDHFTKC MHGDIKKKDT 240 SKEESTKRKG TMD* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 2.0e-44 | 2 | 213 | 218 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 1.0e-52 | 2 | 193 | 197 | + beta-amylase | ||
PLN02801 | PLN02801 | 1.0e-62 | 2 | 234 | 239 | + beta-amylase | ||
PLN02905 | PLN02905 | 2.0e-107 | 2 | 234 | 236 | + beta-amylase | ||
PLN02705 | PLN02705 | 1.0e-172 | 2 | 235 | 235 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI29216.1 | 0 | 1 | 235 | 371 | 606 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001032014.1 | 0 | 1 | 238 | 447 | 685 | BMY2 (BETA-AMYLASE 2); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_002270680.1 | 0 | 1 | 235 | 429 | 664 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304400.1 | 0 | 1 | 250 | 433 | 683 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519919.1 | 0 | 1 | 236 | 431 | 667 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdq_A | 0 | 2 | 234 | 207 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1byd_A | 0 | 2 | 234 | 207 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1byc_A | 0 | 2 | 234 | 207 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1byb_A | 0 | 2 | 234 | 207 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1bya_A | 0 | 2 | 234 | 207 | 444 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CF210586 | 236 | 1 | 235 | 0 |
HO807244 | 234 | 1 | 233 | 0 |
EY839262 | 222 | 5 | 224 | 0 |
FD495665 | 233 | 1 | 231 | 0 |
FR603384 | 192 | 45 | 235 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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