y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_16.112 |
Family | GH14 |
Protein Properties | Length: 547 Molecular Weight: 60365 Isoelectric Point: 6.7301 |
Chromosome | Chromosome/Scaffold: 16 Start: 1729848 End: 1732338 |
Description | beta-amylase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 99 | 506 | 0 |
FVGLPLDAVSDCNTINHARAIAAGLKALKLLGVEGVELPVWWGVAEKEAMGKFQWSSYLALAEMVQKAGLKLHVSLCFHGSKQHKIPLPEWVTQIGEAQP GIYFADRYGQHYKEFLSLSVDNLPVLDGKTPIEVYSEFCKSFKDSFSAFLGNTITGISMGLGPDGELRYPSHHQLPKSNTIPGVGEFQCYDRNMLDILKH DAEASGNPLWGLGGPHDAPSYNQTPDSTNFFKNGGSWESPYGDFFLSWYSNLLIAHGDRLLSLASLTFSDSSVIVSGKVPLMHSWYKTQSHPSELTAGFY NTANRDGYEAVAEMFARNSCKMILPGMDLSDEHQPRESLSSPELLLAQIRRACRKHGVEVSGQNASVSCAPAGLEQIKKNISDENVIDLFTYQRMGAYFF SPDHFPKF |
Full Sequence |
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Protein Sequence Length: 547 Download |
MEVSVTGSSK TKICRTDLAN RELNLWFAKS NFGKNGDYGA KLLSHRPSSV RFRGRTATWS 60 KAGLRFELKA VRSDAVQSDT VSNQASSTRS RPHDGIRLFV GLPLDAVSDC NTINHARAIA 120 AGLKALKLLG VEGVELPVWW GVAEKEAMGK FQWSSYLALA EMVQKAGLKL HVSLCFHGSK 180 QHKIPLPEWV TQIGEAQPGI YFADRYGQHY KEFLSLSVDN LPVLDGKTPI EVYSEFCKSF 240 KDSFSAFLGN TITGISMGLG PDGELRYPSH HQLPKSNTIP GVGEFQCYDR NMLDILKHDA 300 EASGNPLWGL GGPHDAPSYN QTPDSTNFFK NGGSWESPYG DFFLSWYSNL LIAHGDRLLS 360 LASLTFSDSS VIVSGKVPLM HSWYKTQSHP SELTAGFYNT ANRDGYEAVA EMFARNSCKM 420 ILPGMDLSDE HQPRESLSSP ELLLAQIRRA CRKHGVEVSG QNASVSCAPA GLEQIKKNIS 480 DENVIDLFTY QRMGAYFFSP DHFPKFTEFV RSLNQPELHS DDLPMEEEVT ESLGTSSSSS 540 IHMQAV* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 2.0e-84 | 131 | 514 | 398 | + beta-amylase | ||
PLN02161 | PLN02161 | 4.0e-98 | 93 | 514 | 440 | + beta-amylase | ||
PLN02801 | PLN02801 | 1.0e-100 | 98 | 521 | 441 | + beta-amylase | ||
PLN00197 | PLN00197 | 1.0e-115 | 62 | 515 | 476 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 8.0e-126 | 46 | 515 | 480 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAI39245.1 | 0 | 1 | 546 | 1 | 536 | beta-amylase [Glycine max] |
EMBL | CAN66037.1 | 0 | 1 | 545 | 1 | 540 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002276777.1 | 0 | 1 | 545 | 1 | 540 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312750.1 | 0 | 94 | 528 | 2 | 437 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516865.1 | 0 | 1 | 545 | 1 | 544 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fa2_A | 0 | 96 | 543 | 13 | 468 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
PDB | 1b1y_A | 0 | 96 | 514 | 6 | 436 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1v3i_A | 0 | 96 | 514 | 12 | 442 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 2xgi_A | 0 | 96 | 514 | 10 | 440 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 2xgb_A | 0 | 96 | 514 | 10 | 440 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AM904188 | 282 | 151 | 432 | 0 |
HO781436 | 381 | 144 | 524 | 0 |
HO796964 | 366 | 159 | 524 | 0 |
EX256283 | 275 | 273 | 547 | 0 |
HO781436 | 112 | 41 | 151 | 6e-18 |
Sequence Alignments (This image is cropped. Click for full image.) |
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