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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna25108.1-v1.0-hybrid |
Family | GH14 |
Protein Properties | Length: 543 Molecular Weight: 61048.7 Isoelectric Point: 8.7601 |
Chromosome | Chromosome/Scaffold: 5 Start: 6340016 End: 6342453 |
Description | beta-amylase 1 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 79 | 501 | 0 |
FVTMPIDSVDPLGGQVRRRKTMNQSFKALVAAGVEGVVMEVWWGIVERDQPRVYNWQGYLAIVELAKRCGLKVRAVLAFHQCGSGPPDPNCIPLPLWVLD EIDKDPDLAYCDRFGRRNTEYISIGCDSLPVLRGRSPLQVYADFMRNFRDTFKHFIGVIIIGIQIGMGPAGELRYPSCPTQKLTSAWRTREIGEFQCYDK YMLASLNARAREIGMPEWGNGGPIGASNLMQNPEETKFFRSDGGSWNTSYGTFFLEWYSGMLLLHGERLCREAEAIFWGTKANTSAKVAGLHWHYLTQSH PSELTAGYYNTSTRDGYLPIARMFARYGFSLCCPCFDLQDLNEKQMNPVSSPEGFLRQLLSAARVCDIPVEAEPSASSLDDKSFQQVVKMSKYYSYGLEK PSFSFNFVRMDKNMFELHNWVRF |
Full Sequence |
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Protein Sequence Length: 543 Download |
MAIAAPPSTP TFSASFRPTR TYAPPSFTRL FSPPSTTKPL RRLTLSASLN SVSPDNGDLQ 60 GELFHGFSPQ RRGRGSPVFV TMPIDSVDPL GGQVRRRKTM NQSFKALVAA GVEGVVMEVW 120 WGIVERDQPR VYNWQGYLAI VELAKRCGLK VRAVLAFHQC GSGPPDPNCI PLPLWVLDEI 180 DKDPDLAYCD RFGRRNTEYI SIGCDSLPVL RGRSPLQVYA DFMRNFRDTF KHFIGVIIIG 240 IQIGMGPAGE LRYPSCPTQK LTSAWRTREI GEFQCYDKYM LASLNARARE IGMPEWGNGG 300 PIGASNLMQN PEETKFFRSD GGSWNTSYGT FFLEWYSGML LLHGERLCRE AEAIFWGTKA 360 NTSAKVAGLH WHYLTQSHPS ELTAGYYNTS TRDGYLPIAR MFARYGFSLC CPCFDLQDLN 420 EKQMNPVSSP EGFLRQLLSA ARVCDIPVEA EPSASSLDDK SFQQVVKMSK YYSYGLEKPS 480 FSFNFVRMDK NMFELHNWVR FTRFVRQMSD VSIFRAKLDV DSRRFSTSVS DVAKFGMASA 540 YC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02161 | PLN02161 | 8.0e-84 | 77 | 509 | 442 | + beta-amylase | ||
PLN02905 | PLN02905 | 6.0e-88 | 129 | 508 | 383 | + beta-amylase | ||
PLN02801 | PLN02801 | 7.0e-100 | 129 | 508 | 385 | + beta-amylase | ||
PLN00197 | PLN00197 | 4.0e-154 | 72 | 511 | 442 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 4.0e-158 | 7 | 510 | 511 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1b1y_A | 0 | 72 | 508 | 2 | 435 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xgi_A | 0 | 72 | 508 | 6 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xgb_A | 0 | 72 | 508 | 6 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xg9_A | 0 | 72 | 508 | 6 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xfy_A | 0 | 72 | 508 | 6 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
Sequence Alignments (This image is cropped. Click for full image.) |
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