y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.006G215100.1 |
Family | GH14 |
Protein Properties | Length: 288 Molecular Weight: 32968.2 Isoelectric Point: 8.4383 |
Chromosome | Chromosome/Scaffold: 06 Start: 46844915 End: 46846283 |
Description | chloroplast beta-amylase |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 1 | 287 | 0 |
MVEKHGLKLQVVMSFHQCGGNVVDSCRNQQNPDLIYTDRSGQRNPEYISLGCDSLPVLRGRTPIQVYTDYMRSFRERFRDYLGRVIVEIQVGLGPCGELR YPESNGTWKFPGIREFQCYDKYMRASLEAASEAIGKHDWERSLQAISRRNRFLRRDGAWNTKYGQFFLEWYSGKLPEHGDRILTAAKVTFRGTETKLSGK VAGIHWHYRTRSHAAELTAGYYNIRYQDVFNVACMEMKDGEQPEYANCSPEGLVRQVKMATKTAQGELTVENALERYDAGGYAQVLE |
Full Sequence |
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Protein Sequence Length: 288 Download |
MVEKHGLKLQ VVMSFHQCGG NVVDSCRNQQ NPDLIYTDRS GQRNPEYISL GCDSLPVLRG 60 RTPIQVYTDY MRSFRERFRD YLGRVIVEIQ VGLGPCGELR YPESNGTWKF PGIREFQCYD 120 KYMRASLEAA SEAIGKHDWE RSLQAISRRN RFLRRDGAWN TKYGQFFLEW YSGKLPEHGD 180 RILTAAKVTF RGTETKLSGK VAGIHWHYRT RSHAAELTAG YYNIRYQDVF NVACMEMKDG 240 EQPEYANCSP EGLVRQVKMA TKTAQGELTV ENALERYDAG GYAQVLE* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 5.0e-79 | 1 | 287 | 323 | + beta-amylase | ||
pfam01373 | Glyco_hydro_14 | 2.0e-96 | 1 | 287 | 322 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
PLN02801 | PLN02801 | 3.0e-107 | 1 | 286 | 319 | + beta-amylase | ||
PLN00197 | PLN00197 | 7.0e-128 | 1 | 287 | 322 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 0 | 1 | 286 | 320 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN62440.1 | 0 | 1 | 286 | 147 | 466 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002282871.1 | 0 | 1 | 286 | 147 | 466 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326690.1 | 0 | 1 | 286 | 151 | 470 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329547.1 | 0 | 1 | 286 | 152 | 471 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517513.1 | 0 | 1 | 286 | 151 | 470 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wds_A | 0 | 1 | 286 | 78 | 395 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
PDB | 1wdr_A | 0 | 1 | 286 | 78 | 395 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1wdq_A | 0 | 1 | 286 | 78 | 395 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1wdp_A | 0 | 1 | 286 | 78 | 395 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1q6c_A | 0 | 1 | 286 | 78 | 395 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO087014 | 281 | 30 | 286 | 0 |
CK293967 | 311 | 9 | 285 | 0 |
HO794833 | 320 | 1 | 286 | 0 |
BU103692 | 319 | 1 | 285 | 0 |
ES830803 | 290 | 1 | 258 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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