y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.014G083800.2 |
Family | GH14 |
Protein Properties | Length: 398 Molecular Weight: 45124.2 Isoelectric Point: 5.1825 |
Chromosome | Chromosome/Scaffold: 14 Start: 6598351 End: 6603299 |
Description | beta-amylase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 104 | 382 | 0 |
YVMLPLSVIDMNCELVDPEDLLNQLRILKSANVDGVMIDCWWGIVEAHAPQVYNWSGYRRLFQMVRDLKLKLQVVMSFHECGGNVGDDVHIPLPQWVTEI GETNPDIYFTDREERRNTECLTWGIDKERVLKRRTAVEVYFDYMRSFRVEFDEFFQDGIISEIEIGLGPCGELRYPSYPAKHGWTYPGIGEFQCYDKYLM KSLSKAAEVRGHSFWGRGPENAGSYNSAPHEIGFFRDGGDYDSYYGRFFLNWYSQVLIDHGDRVLALANLAFEGTGISA |
Full Sequence |
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Protein Sequence Length: 398 Download |
MAFNACVALS LTNSQLFLVS SMRVCSGFRS SVACNLRCRR LKGDAVSIGS RFRNFGVARA 60 KGQKIEDHSL LDDSMDNTDD EQVGDVRPKV PERDFTGTAY VPVYVMLPLS VIDMNCELVD 120 PEDLLNQLRI LKSANVDGVM IDCWWGIVEA HAPQVYNWSG YRRLFQMVRD LKLKLQVVMS 180 FHECGGNVGD DVHIPLPQWV TEIGETNPDI YFTDREERRN TECLTWGIDK ERVLKRRTAV 240 EVYFDYMRSF RVEFDEFFQD GIISEIEIGL GPCGELRYPS YPAKHGWTYP GIGEFQCYDK 300 YLMKSLSKAA EVRGHSFWGR GPENAGSYNS APHEIGFFRD GGDYDSYYGR FFLNWYSQVL 360 IDHGDRVLAL ANLAFEGTGI SAKEFIGGTK QLVMLLN* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 1.0e-108 | 101 | 388 | 291 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 8.0e-121 | 101 | 383 | 287 | + beta-amylase | ||
PLN02801 | PLN02801 | 5.0e-130 | 100 | 377 | 278 | + beta-amylase | ||
PLN02705 | PLN02705 | 4.0e-172 | 80 | 383 | 304 | + beta-amylase | ||
PLN02905 | PLN02905 | 0 | 8 | 383 | 391 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40368.1 | 0 | 11 | 383 | 124 | 502 | unnamed protein product [Vitis vinifera] |
EMBL | CBI40370.1 | 0 | 18 | 383 | 35 | 393 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273843.1 | 0 | 11 | 383 | 166 | 544 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002320794.1 | 0 | 94 | 383 | 1 | 290 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511858.1 | 0 | 10 | 383 | 18 | 386 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v3i_A | 0 | 100 | 388 | 11 | 298 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 1q6g_A | 0 | 100 | 388 | 11 | 298 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
PDB | 1wds_A | 0 | 100 | 388 | 11 | 298 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
PDB | 1wdq_A | 0 | 100 | 388 | 11 | 298 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1wdp_A | 0 | 100 | 388 | 11 | 298 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |