y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.008G230100.2 |
Family | GH14 |
Protein Properties | Length: 509 Molecular Weight: 57376 Isoelectric Point: 8.296 |
Chromosome | Chromosome/Scaffold: 08 Start: 51641300 End: 51644003 |
Description | chloroplast beta-amylase |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 78 | 466 | 0 |
NSKSAGVEGVMVDAWWGLVEKDGPLNYNWEGYTELVKMVEKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEEISKNQDLVYTDRLGRRNPEYISLGCD SVPVLRGRTPIQAYTDYMRSFRERFRDYLGRVIVEIQVGMGPCGELRYPSYPESNGTWKFPGIGEFQCHDKYMRASLEAAAEAIGQKDWGKGGPHDSGHY KQVPEETGFFKRDGTWNTEYGQFFLEWYSRKLLEHGDRILAAAKGTFHGTGAKLSAKVAGIHWHYRTRSHAAELTAGYYNTRHHDGYLPIAQMFSKHGVV FNFTCMEMRDGEQPEYANCSPEGLVRQVKMATKIARVELAGENALERYDAGSYAQVLATSRSDSGNGLSAFTYLRMNKRLFEGDNWRHL |
Full Sequence |
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Protein Sequence Length: 509 Download |
MALTLRSSTS FIKLKETNNF KTPDDFLGSI SFAQMKPSCR IRARNSMSMQ EAPLVHGKIS 60 TKETEKLYSL TISHAENNSK SAGVEGVMVD AWWGLVEKDG PLNYNWEGYT ELVKMVEKHG 120 LKLQVVMSFH QCGGNVGDSC SIPLPPWVLE EISKNQDLVY TDRLGRRNPE YISLGCDSVP 180 VLRGRTPIQA YTDYMRSFRE RFRDYLGRVI VEIQVGMGPC GELRYPSYPE SNGTWKFPGI 240 GEFQCHDKYM RASLEAAAEA IGQKDWGKGG PHDSGHYKQV PEETGFFKRD GTWNTEYGQF 300 FLEWYSRKLL EHGDRILAAA KGTFHGTGAK LSAKVAGIHW HYRTRSHAAE LTAGYYNTRH 360 HDGYLPIAQM FSKHGVVFNF TCMEMRDGEQ PEYANCSPEG LVRQVKMATK IARVELAGEN 420 ALERYDAGSY AQVLATSRSD SGNGLSAFTY LRMNKRLFEG DNWRHLVEFV KNMSEGGRKI 480 SECDSRGTNL YIGFIKDKTV EKKEVALV* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 6.0e-138 | 80 | 473 | 401 | + beta-amylase | ||
pfam01373 | Glyco_hydro_14 | 6.0e-166 | 80 | 469 | 403 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
PLN02801 | PLN02801 | 6.0e-175 | 80 | 473 | 402 | + beta-amylase | ||
PLN02803 | PLN02803 | 0 | 1 | 508 | 550 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 80 | 476 | 403 | + beta-amylase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN62440.1 | 0 | 1 | 508 | 1 | 543 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002282871.1 | 0 | 1 | 508 | 1 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326690.1 | 0 | 1 | 508 | 1 | 547 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329547.1 | 0 | 1 | 508 | 1 | 548 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517513.1 | 0 | 1 | 508 | 1 | 547 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdp_A | 0 | 80 | 473 | 43 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1q6c_A | 0 | 80 | 473 | 43 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 80 | 473 | 43 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1ukp_D | 0 | 80 | 473 | 43 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_C | 0 | 80 | 473 | 43 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794833 | 412 | 87 | 496 | 0 |
BU103692 | 426 | 80 | 503 | 0 |
CO087014 | 299 | 147 | 445 | 0 |
ES830803 | 387 | 82 | 464 | 0 |
HO825836 | 386 | 123 | 506 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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