y
Basic Information | |
---|---|
Species | Mimulus guttatus |
Cazyme ID | mgv1a004577m |
Family | GH14 |
Protein Properties | Length: 520 Molecular Weight: 57943.9 Isoelectric Point: 8.6968 |
Chromosome | Chromosome/Scaffold: 242 Start: 239192 End: 242159 |
Description | beta-amylase 1 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH14 | 75 | 476 | 0 |
YVTLPADAVGPTAQTMSRKRAMAQSFRALAAAGVEGVVMEVWWGLVEREFPRSYNWRGYLEIVEMAKRFGLKVRAVMAFHQFGSGSDDPFWIPLPLWVLE EMDKDPDVSYADRFGRRNMEYISLGCDVLPILHGRSPIQAYSDLMRNFRDTFRPFLGGIITGIQVGLGPGGELRYPSCPTHKLTWAWRTLELGEFQCYDK YMLASLNKCAHEIGMREWLNVGPIATTTSPMQNPENTPDGEFFLGWYSRMLLLHGERICREAETIFRGKKVNMSGKLGGAHPLTSGYYSTAARDGYTPII RMFGRYGFTVCCACFEMQDSDKRRINPSSRPEGLVEQIVLAARICDVPLEGENGSTNLDGGSFEQVVKMSKFYSDGLDNPSFSFNFVRMDRNLFESRNWA SF |
Full Sequence |
---|
Protein Sequence Length: 520 Download |
MAIASPSAPN FCCTTRSEST HRRLWSQQVS SRAGSKRVSI RPGISSRLNA SSDGELVYEL 60 NYNSQRRRRG AFPVYVTLPA DAVGPTAQTM SRKRAMAQSF RALAAAGVEG VVMEVWWGLV 120 EREFPRSYNW RGYLEIVEMA KRFGLKVRAV MAFHQFGSGS DDPFWIPLPL WVLEEMDKDP 180 DVSYADRFGR RNMEYISLGC DVLPILHGRS PIQAYSDLMR NFRDTFRPFL GGIITGIQVG 240 LGPGGELRYP SCPTHKLTWA WRTLELGEFQ CYDKYMLASL NKCAHEIGMR EWLNVGPIAT 300 TTSPMQNPEN TPDGEFFLGW YSRMLLLHGE RICREAETIF RGKKVNMSGK LGGAHPLTSG 360 YYSTAARDGY TPIIRMFGRY GFTVCCACFE MQDSDKRRIN PSSRPEGLVE QIVLAARICD 420 VPLEGENGST NLDGGSFEQV VKMSKFYSDG LDNPSFSFNF VRMDRNLFES RNWASFTKFV 480 RQISTISMFG AGSDFNGGGN MSSSPSATAA FAGAVLAAH* 540 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02161 | PLN02161 | 3.0e-68 | 64 | 485 | 452 | + beta-amylase | ||
PLN02905 | PLN02905 | 1.0e-69 | 73 | 483 | 435 | + beta-amylase | ||
PLN02801 | PLN02801 | 3.0e-89 | 125 | 483 | 382 | + beta-amylase | ||
PLN00197 | PLN00197 | 8.0e-127 | 4 | 483 | 514 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 6.0e-132 | 63 | 484 | 444 | + beta-amylase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAH90978.1 | 0 | 74 | 504 | 106 | 554 | Os01g0236800 [Oryza sativa Japonica Group] |
EMBL | CAN65860.1 | 0 | 1 | 495 | 1 | 528 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002263816.1 | 0 | 41 | 495 | 133 | 617 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002297961.1 | 0 | 1 | 497 | 1 | 535 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002304568.1 | 0 | 67 | 484 | 1 | 437 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2xgi_A | 0 | 74 | 483 | 12 | 439 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1), Apo Form |
PDB | 2xgb_A | 0 | 74 | 483 | 12 | 439 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1), Apo Form |
PDB | 2xg9_A | 0 | 74 | 483 | 12 | 439 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1), Apo Form |
PDB | 2xfy_A | 0 | 74 | 483 | 12 | 439 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1), Apo Form |
PDB | 2xfr_A | 0 | 74 | 483 | 12 | 439 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1), Apo Form |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
GR117443 | 263 | 179 | 441 | 0 |
GO975087 | 254 | 131 | 384 | 0 |
GR143234 | 240 | 256 | 495 | 0 |
GR151322 | 201 | 304 | 504 | 0 |
GR151321 | 221 | 1 | 221 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|