y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g009335m |
Family | GH14 |
Protein Properties | Length: 538 Molecular Weight: 60393.5 Isoelectric Point: 5.791 |
Chromosome | Chromosome/Scaffold: 00494 Start: 100801 End: 105849 |
Description | beta-amylase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 252 | 532 | 0 |
YVMLANHVINNFCQLVDPELIRQEISHMKALNVDGVIVNCWWGIVEGWNPQKYAWSGYRELFNIIREFNLKVQVVMAFHEYGANDSGDAWISLPQWVMEI GKGNQDIFFTDREGRRNTECLSWGVDKERVLNGRTGIEVYFDFMRSFRTEFDDLFVAGLICAVEIGLGPSGELKYPSLSERMGWRYPGIGEFQCYDRYLQ QSLRKAAKLRGHSFWARGPDNAGQYNSLPHETGFFCERGDYDSYYGRFFLNWYAQTLIDHADNVLSLASLAFEETKIIVKV |
Full Sequence |
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Protein Sequence Length: 538 Download |
MNTIENIDEN PNQELLTQPP TQTQNQTQSH SRRPRGFAAT AAAAAAAAAA NNNSNSNNNN 60 ASSGKGKKER EKEKERTKLR ERHRRAITSR MLAGLRQYGN FPLPARADMN DVLAALAREA 120 GWTVEPDGTT YRLSNQSQSH HHLHQQMAAA AATTTAAFPV RSVESPLSVK NCSVKASVEC 180 QPSVLRIDES LSPASFDSVV IPERDSRGGE FNASTSPINN SVECLEADQL IQDVRAGEHE 240 DDFTGTPYIP VYVMLANHVI NNFCQLVDPE LIRQEISHMK ALNVDGVIVN CWWGIVEGWN 300 PQKYAWSGYR ELFNIIREFN LKVQVVMAFH EYGANDSGDA WISLPQWVME IGKGNQDIFF 360 TDREGRRNTE CLSWGVDKER VLNGRTGIEV YFDFMRSFRT EFDDLFVAGL ICAVEIGLGP 420 SGELKYPSLS ERMGWRYPGI GEFQCYDRYL QQSLRKAAKL RGHSFWARGP DNAGQYNSLP 480 HETGFFCERG DYDSYYGRFF LNWYAQTLID HADNVLSLAS LAFEETKIIV KVCMELS* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 2.0e-78 | 249 | 532 | 289 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 3.0e-89 | 249 | 526 | 280 | + beta-amylase | ||
PLN02801 | PLN02801 | 7.0e-106 | 248 | 523 | 276 | + beta-amylase | ||
PLN02705 | PLN02705 | 0 | 86 | 532 | 450 | + beta-amylase | ||
PLN02905 | PLN02905 | 0 | 86 | 532 | 454 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI29216.1 | 0 | 77 | 532 | 19 | 460 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_199343.1 | 0 | 9 | 532 | 15 | 538 | BMY2 (BETA-AMYLASE 2); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_002270680.1 | 0 | 70 | 532 | 70 | 518 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304400.1 | 0 | 2 | 532 | 5 | 522 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519919.1 | 0 | 7 | 532 | 1 | 520 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1q6g_A | 0 | 248 | 537 | 11 | 297 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
PDB | 1wds_A | 0 | 248 | 537 | 11 | 297 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
PDB | 1wdp_A | 0 | 248 | 537 | 11 | 297 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
PDB | 1v3i_A | 0 | 248 | 537 | 11 | 297 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 1q6c_A | 0 | 248 | 537 | 11 | 297 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EY757606 | 237 | 295 | 531 | 0 |
EY780069 | 257 | 270 | 525 | 0 |
JG649066 | 240 | 293 | 532 | 0 |
EY761857 | 178 | 198 | 375 | 0 |
EY761857 | 83 | 375 | 457 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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