y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g037037m |
Family | GH14 |
Protein Properties | Length: 702 Molecular Weight: 78731.6 Isoelectric Point: 5.6175 |
Chromosome | Chromosome/Scaffold: 00001 Start: 1920267 End: 1927212 |
Description | beta-amylase 7 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 267 | 684 | 0 |
YVMLPLGVINLKCELIDPDGLLKQLRVLKSINVDGVMVDCWWGIVEAHTPQDYNWNGYKKLFQMVSELKLKLQVVMSFHECGGNVGDDVCIPLPHWVAEI GRINPHIFFTDREGRRNPECLSWGIDKERVLRGRTALEVYFDYMRSFRVEFDEFFQNGVISMVVVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYLL KNLRKASEARGHSFWARGPDNAGSYNSRPHETGFFCDGGDYNGYYGRFFLNWYSQVLVDHGDRVLSLAKLAFEGTCIGAKLSGFHWWYKTASHAAELTAG FYNPCNRDGYAAIVATLKKNGAVLNFASAELHTLERQEEFSEALADPDGLMWQVMNAAWDVCTPVASENTLPCHDRVGYNKILDNAKPLSDPDGRHFLSF SYLRLGLGLMERENFMEF |
Full Sequence |
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Protein Sequence Length: 702 Download |
MATDMQRLIG TSEEDDEEEM DMDVKEEDDD EEENGEKHGR RQVMVGVDVC TAPSSSNNNQ 60 FQHQQEIQEQ AGTPGGGGVR RSRPLEEKER TKLRERHRRA ITARILAGLR RHGNYNLRVR 120 ADINDVIAAL AREAGWVVLP DGTTFPSRSQ GSRTAGGASS MVTSSSSHMV SQQTPSTSLR 180 GVSSGYRSSV EYNTCQMKGV FMPTPSPYDL SPIAQSQPSL VEDGREQTEI QSHIGGPVDA 240 VSDKQIADVP PKLPERDFSG TPYVPVYVML PLGVINLKCE LIDPDGLLKQ LRVLKSINVD 300 GVMVDCWWGI VEAHTPQDYN WNGYKKLFQM VSELKLKLQV VMSFHECGGN VGDDVCIPLP 360 HWVAEIGRIN PHIFFTDREG RRNPECLSWG IDKERVLRGR TALEVYFDYM RSFRVEFDEF 420 FQNGVISMVV VGLGPCGELR YPSCPVKHGW RYPGIGEFQC YDQYLLKNLR KASEARGHSF 480 WARGPDNAGS YNSRPHETGF FCDGGDYNGY YGRFFLNWYS QVLVDHGDRV LSLAKLAFEG 540 TCIGAKLSGF HWWYKTASHA AELTAGFYNP CNRDGYAAIV ATLKKNGAVL NFASAELHTL 600 ERQEEFSEAL ADPDGLMWQV MNAAWDVCTP VASENTLPCH DRVGYNKILD NAKPLSDPDG 660 RHFLSFSYLR LGLGLMEREN FMEFERFVKR MHGEAVLDLQ V* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 6.0e-129 | 264 | 691 | 436 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 2.0e-147 | 264 | 691 | 434 | + beta-amylase | ||
PLN02801 | PLN02801 | 6.0e-170 | 263 | 694 | 439 | + beta-amylase | ||
PLN02905 | PLN02905 | 0 | 1 | 701 | 703 | + beta-amylase | ||
PLN02705 | PLN02705 | 0 | 71 | 694 | 633 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAE99337.1 | 0 | 1 | 698 | 1 | 682 | putative beta-amylase [Arabidopsis thaliana] |
EMBL | CBI40368.1 | 0 | 44 | 701 | 1 | 657 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_182112.2 | 0 | 1 | 698 | 1 | 682 | BAM7 (BETA-AMYLASE 7); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_002273843.1 | 0 | 1 | 701 | 1 | 699 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002511857.1 | 0 | 1 | 701 | 4 | 704 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wds_A | 0 | 263 | 694 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
PDB | 1ukp_D | 0 | 263 | 694 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_C | 0 | 263 | 694 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_B | 0 | 263 | 694 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_A | 0 | 263 | 694 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CX642630 | 237 | 363 | 599 | 0 |
JG638376 | 267 | 272 | 538 | 0 |
DT587209 | 255 | 280 | 534 | 0 |
DV021150 | 292 | 349 | 640 | 0 |
GO367915 | 286 | 275 | 560 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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