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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna27696.1-v1.0-hybrid |
Family | GH14 |
Protein Properties | Length: 646 Molecular Weight: 72815.9 Isoelectric Point: 5.8338 |
Chromosome | Chromosome/Scaffold: 5 Start: 13765737 End: 13770365 |
Description | beta-amylase 2 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 225 | 611 | 0 |
FVNNYCQLVDPDGLRQELTHLQSLNVDGVVVDCWWGIVECWSPHKYDWSGYRGLFNIVREFKLKLQVVMAFHEYGRRESGDALIPLPKWILDIGKENQDI FFTDREGRRNTECLSWGVDKERVLHGRTGVEVYFDLMRSFRTEFDDLFVEGLISAVEIGLGASGELKYPSFSERMGWRYPGVGEFQCYDRYLQQSLQKAA KLRGHSFWARGPDNAGEYNSRPHETGFFCERGDYDSYYGRFFLHWYAKTLIDHADNVLSLASLAFDETQVIVKVPSVYWWYKTPSHAAELTSGYYNPKNQ DGYSLVFEVLKKHSVTVKFVCSAPNDGDEALGDPEGLSWQVLNLAWDRGLTVAGENALSCYDREGCMRIVELVKPRNDPDRHHFTFF |
Full Sequence |
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Protein Sequence Length: 646 Download |
MNDDSLQQDL DPQSDQSSDY LPPQPHPLPS QPHPHPRRPR GFAATAAAGS AGPISPSTKG 60 RREREKEKER TKLRERLRRS ITSRMLAGLR QYGNFPLPAR ADMNDVLAAL AREAGWVVEP 120 DGTTYRQSPP QIGGAYSMNL RSVETPVSLE CHPQSVARID ESLSPASLDS VVIAEKNDRF 180 SSGSPAMNSV NCLEADQLMQ HIPSATSFAP APYVPLYVTL VATGFVNNYC QLVDPDGLRQ 240 ELTHLQSLNV DGVVVDCWWG IVECWSPHKY DWSGYRGLFN IVREFKLKLQ VVMAFHEYGR 300 RESGDALIPL PKWILDIGKE NQDIFFTDRE GRRNTECLSW GVDKERVLHG RTGVEVYFDL 360 MRSFRTEFDD LFVEGLISAV EIGLGASGEL KYPSFSERMG WRYPGVGEFQ CYDRYLQQSL 420 QKAAKLRGHS FWARGPDNAG EYNSRPHETG FFCERGDYDS YYGRFFLHWY AKTLIDHADN 480 VLSLASLAFD ETQVIVKVPS VYWWYKTPSH AAELTSGYYN PKNQDGYSLV FEVLKKHSVT 540 VKFVCSAPND GDEALGDPEG LSWQVLNLAW DRGLTVAGEN ALSCYDREGC MRIVELVKPR 600 NDPDRHHFTF FVYQQPSPLV QGTVCFSELD FFIKCMHGDV AGNLV* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 1.0e-94 | 238 | 586 | 357 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 1.0e-113 | 193 | 586 | 405 | + beta-amylase | ||
PLN02801 | PLN02801 | 2.0e-142 | 211 | 639 | 438 | + beta-amylase | ||
PLN02705 | PLN02705 | 0 | 80 | 644 | 589 | + beta-amylase | ||
PLN02905 | PLN02905 | 0 | 80 | 644 | 603 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdq_A | 0 | 213 | 639 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1wds_A | 0 | 213 | 639 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
PDB | 1wdp_A | 0 | 213 | 639 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
PDB | 1q6c_A | 0 | 213 | 639 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 213 | 639 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
Sequence Alignments (This image is cropped. Click for full image.) |
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