y
Basic Information | |
---|---|
Species | Glycine max |
Cazyme ID | Glyma01g41190.1 |
Family | GH14 |
Protein Properties | Length: 549 Molecular Weight: 61793.3 Isoelectric Point: 8.434 |
Chromosome | Chromosome/Scaffold: 01 Start: 52777708 End: 52780878 |
Description | chloroplast beta-amylase |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH14 | 91 | 501 | 0 |
FVMLPLDTVTMGGTLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKEGPLKYNWEAYAELVQMVQRHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEE ISKNPELVYTDRSGRRNPEYISLGCDSMPVLRGRTPLQVYSDYMRSFRYRFRDYLGSVIIEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMR ASLEASTEAIGKKEWGKNGPHDSGQYNQFPEDTGFFQREGTWNTEYGRFFLDWYSTKLLEHGEKILVSAKGIFNSCGVKLSAKVAGIHWHYKARSHAAEL TAGYYNTRFRDGYLPIAQMLAKHGVVLNFTCMEMRDREQPEHCSPEGLVHQVKIAARTAEAELAGENALERYDAGAFSQVLSTSNSGSGLAAFTYLRMNK RLFEGDNWRLF |
Full Sequence |
---|
Protein Sequence Length: 549 Download |
MALTLRSSIS LVNQKETKLP KAKDEVPTKV FYFGKTNPSF RLRAKSSMQQ THVTPNNSFN 60 SEVTMINEKR EKVHAPSVAH SHNDSMRVPV FVMLPLDTVT MGGTLNKPRA MNASLMALKS 120 AGVEGVMVDA WWGLVEKEGP LKYNWEAYAE LVQMVQRHGL KLQVVMSFHQ CGGNVGDSCS 180 IPLPPWVLEE ISKNPELVYT DRSGRRNPEY ISLGCDSMPV LRGRTPLQVY SDYMRSFRYR 240 FRDYLGSVII EIQVGMGPCG ELRYPSYPES NGTWRFPGIG EFQCYDKYMR ASLEASTEAI 300 GKKEWGKNGP HDSGQYNQFP EDTGFFQREG TWNTEYGRFF LDWYSTKLLE HGEKILVSAK 360 GIFNSCGVKL SAKVAGIHWH YKARSHAAEL TAGYYNTRFR DGYLPIAQML AKHGVVLNFT 420 CMEMRDREQP EHCSPEGLVH QVKIAARTAE AELAGENALE RYDAGAFSQV LSTSNSGSGL 480 AAFTYLRMNK RLFEGDNWRL FVEFVKSMSE GGKRQRLPES DSCGTHLYVG HITGIQKQQE 540 QAQEVALV* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 5.0e-144 | 88 | 508 | 432 | + beta-amylase | ||
pfam01373 | Glyco_hydro_14 | 3.0e-165 | 91 | 504 | 425 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
PLN02803 | PLN02803 | 0 | 1 | 534 | 538 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 88 | 519 | 442 | + beta-amylase; Provisional | ||
PLN02801 | PLN02801 | 0 | 88 | 508 | 433 | + beta-amylase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAI39244.1 | 0 | 1 | 548 | 1 | 540 | beta-amylase [Glycine max] |
EMBL | CAN62440.1 | 0 | 1 | 548 | 1 | 543 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002282871.1 | 0 | 1 | 548 | 1 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326690.1 | 0 | 1 | 542 | 1 | 545 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517513.1 | 0 | 1 | 548 | 1 | 547 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdp_A | 0 | 88 | 508 | 12 | 441 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 1q6c_A | 0 | 88 | 508 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 88 | 508 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1v3i_A | 0 | 88 | 508 | 12 | 441 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 1v3h_A | 0 | 88 | 508 | 12 | 441 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO781538 | 402 | 30 | 431 | 0 |
HO794833 | 411 | 126 | 532 | 0 |
BU103692 | 537 | 1 | 532 | 0 |
HO825836 | 375 | 162 | 532 | 0 |
ES830803 | 318 | 121 | 438 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|