y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10004689m |
Family | GH14 |
Protein Properties | Length: 544 Molecular Weight: 59780.6 Isoelectric Point: 7.0697 |
Chromosome | Chromosome/Scaffold: 9 Start: 2230934 End: 2233792 |
Description | beta-amylase 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 95 | 503 | 0 |
FVGLPLDTVSDANTVNHAKAIAAGLKALKLLGVEGVELPVWWGVAEKEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHALKQPKIPLPDWVSQIGESQS SIFYTDQSGQQFKGCLSLAVDDLPVLHGKTPIQVYQEFCESFKSSFKPFMGTTITGISMGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQQ HAEANGNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGF YNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGENVVDLFTYQRMGAYF FSPEHFPSF |
Full Sequence |
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Protein Sequence Length: 544 Download |
MEASLMGNSQ ANVVKTGLPY RDSRVCCSYK NKIDDKVLFV NRVSFLGQNR SANLRKAQLR 60 FCTKASVQSQ PLPSDRDSGP LSSARPKSLD AVRLFVGLPL DTVSDANTVN HAKAIAAGLK 120 ALKLLGVEGV ELPVWWGVAE KEAMGKYNWS GYLAVAEMVE KIGLKLHVSL CFHALKQPKI 180 PLPDWVSQIG ESQSSIFYTD QSGQQFKGCL SLAVDDLPVL HGKTPIQVYQ EFCESFKSSF 240 KPFMGTTITG ISMGLGPDGE LRYPSHHRLA KSSKIPGVGE FQCCDRNMLN LLQQHAEANG 300 NPLWGLRGPH DAPSYDESPN SNSFFKDNGG SWESPYGDFF LSWYSSQLIS HGNCLLSLAS 360 STFGETGVSI YGKIPLIHSW YKTRSHPSEL TAGFYNTAKR DGYAAVAEMF AKNSCKMILP 420 GMDLSDEHQP RESFSSPESL LAQIRTACNK HGVEVSGQNS SVTGAPGGFE QMKKNLFGEN 480 VVDLFTYQRM GAYFFSPEHF PSFTKFVRNL NQLELHGDDL PVEEEVTESV HTNANMNIQV 540 QAA* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 8.0e-86 | 127 | 518 | 406 | + beta-amylase | ||
PLN02801 | PLN02801 | 5.0e-95 | 92 | 518 | 442 | + beta-amylase | ||
PLN02161 | PLN02161 | 3.0e-100 | 92 | 511 | 437 | + beta-amylase | ||
PLN00197 | PLN00197 | 1.0e-112 | 92 | 531 | 453 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 8.0e-121 | 81 | 512 | 439 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD38148.1 | 0 | 93 | 543 | 1 | 450 | AF139501_1 beta-amylase [Prunus armeniaca] |
EMBL | CAI39245.1 | 0 | 1 | 543 | 1 | 536 | beta-amylase [Glycine max] |
EMBL | CAN66037.1 | 0 | 1 | 543 | 1 | 541 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002276777.1 | 0 | 1 | 543 | 1 | 541 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002516865.1 | 0 | 1 | 543 | 1 | 545 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fa2_A | 0 | 92 | 540 | 13 | 468 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
PDB | 1b1y_A | 0 | 92 | 511 | 6 | 436 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1v3i_A | 0 | 89 | 518 | 9 | 444 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 1q6g_A | 0 | 89 | 518 | 9 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
PDB | 1q6d_A | 0 | 89 | 518 | 9 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO781436 | 406 | 140 | 544 | 0 |
HO796964 | 391 | 155 | 544 | 0 |
CB292432 | 278 | 142 | 419 | 0 |
EG631213 | 354 | 191 | 544 | 0 |
HO781436 | 111 | 38 | 146 | 0.000000000005 |
Sequence Alignments (This image is cropped. Click for full image.) |
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